Gene detail

Detailed information of ENSAPQP00000026195.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB4018960.1, zinc metalloprotease [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

ENSAPQT00000029198

ATGACGCTTGCTGGGTTTTTAGGATTAATAATTCCTGTTTCTTTGGCCATCTCTAATGTCCATGGACTTGAAATGACAAGACGATGTATACTTCCTGACATTCCTCACAACCAAAATCCTGCATCACTCCCGGAGAACACAGATCATCACAGTTTAAATGACCGTGGCTTGTCTTCTCAAGATGTTCCAAACAGATTGTGTAAACAACGATACATTGTTCCTGTTCTTTGGCATGTTATTTCTGATTCAAGCAAGAATGGCGACGTGTCAGACGCAACTTTACAACGACAAATTGATATCTTAAATGGTGCGTATGAAAACACTTCGCTCATATTTAAAATGGAATCAGTGGAACGGGTTATCAACGACAGTTGGAGCAGAGATTGTCTTTCCCATATGCCACAATTCCAAGAAATCCTCGCCCGCTCAACTGACATCAAACTAAATCTGTACACATGTACATTGAGGAATCTTAACGTGCTTGGACACTCCTCCTATCCTTGGTCACATGAAGAAGATAGTGTTTATCATGGGGTTGTCATTCACACAGGTACCTTACCCGGTGGGACAATATCACCCATAAATGAAGGAGATAACCTGGTTCACGAGGTGGGCCATTACTTCGGTTTACTTCACACTTTCGAGGGTGGGTGTGAAGGTGGTGATGAAGTGGAAGATACACCTGCTGCAGCTTATCCAACCTACACGTGTCCTCATACACCTGTGGACTCTTGTCCTGACCAACCTGGATTCGACCCTCTACATAACTATATGGGATATAATCAAGATTCGTGCATTGATCATTTTACTCCGGGTCAAGTGGAGAGAATAGAGACGCATCTTGGAATGTATCGCAAAAAGCTCAAGAGACTTATAGAAAAACCATGCGCGATCGACTCCGTATTCCGTTGGTCAGACGGTTTCACTTATTTCTTTGCTGGAGAAAGTTATTACCGTTACAACGAAATATCACGTGGTATCGATTCCGGCTACCCACGAGCAATTACCAAGCACTGGCGAGGCGTCCCGAACAATATCGATGGTGTATTTCGTTACGTTAATGGTATTACGTATTTCTTCAAGGGATCAGAGTATTACAGATTTAATGACAGCACACTTCAAGTTGATCCAGGGTATCCGAGGAAAATTATGGATTTTTGGAAAGGAATACCAGATGACATTGATGATGTCATAAGATATAGTAATGGCATCacatatttcttcaaaaataatcTTTACTATCGCTTCAACTCAAGTACAGCAACTGTGGACAATGGTTATCCAACGAAAATTAGGCAATATTGGGTTGACATACCCAGGAACGTACAAGCCGCATTCACTTGGTACAATGGTGGCGTATACTTTTTCAAAGACTCCAAATATTGGCATTTTGTTCCTGGACAGAACTCACCAGGCAAATCGTACCCAAAGTCACTGACGGATTGGTGGAGTGAAGACGAACAAACATACCAGGAATGTAACGCGTTCAGACATCTCAATGGCTACACTTACTTTATATCTAAGCAACAATACTGGCGTTACAATGATTTCAAGAATCACATTGACTACACATATCCACATGCTTTGAGTAACTGGATAAATCTACCAGCTACCATTGATGGTTTGTTTGTGTGGTCTGATGATCAACTGTACGCTTTCAGTGGACAGTATTACTACCAAGTGGTCTTCAATGTAAACTCAACGCATTCTGTCATtcgtcaaaatatttcatccttcTGGCATGGAGTGCCAAGTCACATCGACGCTGTGTTCAGAGCAAGTGACGGTTTAACATATTTCTTCAAAGATTCGCAGTACTACCTTTTCAACGACACTCTACATCAAGTCGACACAGGCTACCCTAAACCTATTTCTTCGTTCTGGAAGGGAATTCCGAAAGATATTGGAACCGTATTCCGCTGGTCAAATGGTCAGACATATTTCTTCAAGGATAAGCAGTATTACAGGTTTAATTTCACTCAGGGTGCAGTGGACGATGGGTATCCGCGTGAAATAGCAGGGGCCTGGAGAGGAATCATGTACAATGCAAACTCATAA

Transcript

ENSAPQT00000029198

gggaaaacaacatttttcaCTCGTACCGTAGCAATACGTTTTAAACTGTTGCTAAGGTTTTATCTTCAAATTGATTCGCAACGATGACGCTTGCTGGGTTTTTAGGATTAATAATTCCTGTTTCTTTGGCCATCTCTAATGTCCATGGACTTGAAATGACAAGACGATGTATACTTCCTGACATTCCTCACAACCAAAATCCTGCATCACTCCCGGAGAACACAGATCATCACAGTTTAAATGACCGTGGCTTGTCTTCTCAAGATGTTCCAAACAGATTGTGTAAACAACGATACATTGTTCCTGTTCTTTGGCATGTTATTTCTGATTCAAGCAAGAATGGCGACGTGTCAGACGCAACTTTACAACGACAAATTGATATCTTAAATGGTGCGTATGAAAACACTTCGCTCATATTTAAAATGGAATCAGTGGAACGGGTTATCAACGACAGTTGGAGCAGAGATTGTCTTTCCCATATGCCACAATTCCAAGAAATCCTCGCCCGCTCAACTGACATCAAACTAAATCTGTACACATGTACATTGAGGAATCTTAACGTGCTTGGACACTCCTCCTATCCTTGGTCACATGAAGAAGATAGTGTTTATCATGGGGTTGTCATTCACACAGGTACCTTACCCGGTGGGACAATATCACCCATAAATGAAGGAGATAACCTGGTTCACGAGGTGGGCCATTACTTCGGTTTACTTCACACTTTCGAGGGTGGGTGTGAAGGTGGTGATGAAGTGGAAGATACACCTGCTGCAGCTTATCCAACCTACACGTGTCCTCATACACCTGTGGACTCTTGTCCTGACCAACCTGGATTCGACCCTCTACATAACTATATGGGATATAATCAAGATTCGTGCATTGATCATTTTACTCCGGGTCAAGTGGAGAGAATAGAGACGCATCTTGGAATGTATCGCAAAAAGCTCAAGAGACTTATAGAAAAACCATGCGCGATCGACTCCGTATTCCGTTGGTCAGACGGTTTCACTTATTTCTTTGCTGGAGAAAGTTATTACCGTTACAACGAAATATCACGTGGTATCGATTCCGGCTACCCACGAGCAATTACCAAGCACTGGCGAGGCGTCCCGAACAATATCGATGGTGTATTTCGTTACGTTAATGGTATTACGTATTTCTTCAAGGGATCAGAGTATTACAGATTTAATGACAGCACACTTCAAGTTGATCCAGGGTATCCGAGGAAAATTATGGATTTTTGGAAAGGAATACCAGATGACATTGATGATGTCATAAGATATAGTAATGGCATCacatatttcttcaaaaataatcTTTACTATCGCTTCAACTCAAGTACAGCAACTGTGGACAATGGTTATCCAACGAAAATTAGGCAATATTGGGTTGACATACCCAGGAACGTACAAGCCGCATTCACTTGGTACAATGGTGGCGTATACTTTTTCAAAGACTCCAAATATTGGCATTTTGTTCCTGGACAGAACTCACCAGGCAAATCGTACCCAAAGTCACTGACGGATTGGTGGAGTGAAGACGAACAAACATACCAGGAATGTAACGCGTTCAGACATCTCAATGGCTACACTTACTTTATATCTAAGCAACAATACTGGCGTTACAATGATTTCAAGAATCACATTGACTACACATATCCACATGCTTTGAGTAACTGGATAAATCTACCAGCTACCATTGATGGTTTGTTTGTGTGGTCTGATGATCAACTGTACGCTTTCAGTGGACAGTATTACTACCAAGTGGTCTTCAATGTAAACTCAACGCATTCTGTCATtcgtcaaaatatttcatccttcTGGCATGGAGTGCCAAGTCACATCGACGCTGTGTTCAGAGCAAGTGACGGTTTAACATATTTCTTCAAAGATTCGCAGTACTACCTTTTCAACGACACTCTACATCAAGTCGACACAGGCTACCCTAAACCTATTTCTTCGTTCTGGAAGGGAATTCCGAAAGATATTGGAACCGTATTCCGCTGGTCAAATGGTCAGACATATTTCTTCAAGGATAAGCAGTATTACAGGTTTAATTTCACTCAGGGTGCAGTGGACGATGGGTATCCGCGTGAAATAGCAGGGGCCTGGAGAGGAATCATGTACAATGCAAACTCATAACGTAGActcaaaaaattgaaatgatgGTATAATACAAAGTGCAAAATAAAATGGGTTATTAAAATTCATCAGAACAACTCTTCATTGTTTTGGTGATGTTTACATTTATTGGGAAGACATCATGTTAGTTTATTAGAGAAAGCTAGCGTCTATAAACGTAGATAGAAGACTATAAAAATGTTACTTTATTCAAAAGCGTTATCGCAGTGTAGTGCACACATAATGTAAGGTATGTGATGTATAGGTAGATTTTACAGACACTCAGCACGTAGGCAGACATTTCCTCTACAGTTATAGCAAACAAACGTCGTCTATTTCATGTACTTATCTTCTTGTTCAGCCAGAAGTTTTGCCGACGATTTAGCATCAAAGAATAGTTCATTAGTCTCGTCAATATCGGCTTTGTTTATAATTTCTCTTCCTAAAATAAATTCAGCGTAAATGAAGTTCATACTGGAACGCCATACGTGTCTAGTTTAGAAAATACTGTAGAAATTATTACCGTGGTTCTGTACAAATACTTTATGGAAGCACGAGGGGAATTTTCATGGAGAAACTTTGATTCTCCAATAAAATCCAATAATATATTTGACATACC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A4RGT4	Extracellular metalloprotease MGG_08041 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=MGG_08041 PE=3 SV=1
C9S5C6	Extracellular metalloprotease VDBG_01143 OS=Verticillium alfalfae (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) OX=526221 GN=VDBG_01143 PE=3 SV=1
Q871C5	Extracellular metalloprotease NCU07200 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=B8G12.220 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010105 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00045 all species →	Hemopexin	Hemopexin	Repeat	Interproscan
PF05572 all species →	Peptidase_M43	Pregnancy-associated plasma protein-A	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036375 all species →	Homologous_superfamily	Hemopexin-like domain superfamily	Interproscan
IPR018487 all species →	Repeat	Hemopexin-like repeats	Interproscan
IPR008754 all species →	Domain	Peptidase M43, pregnancy-associated plasma-A	Interproscan
IPR024079 all species →	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR000585 all species →	Domain	Hemopexin-like domain	Interproscan
IPR018486 all species →	Conserved_site	Hemopexin, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47466 all species →	-	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008237 all species →	Molecular Function	metallopeptidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000026195.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.