Gene detail

Detailed information of ENSAPQP00000027517.1 in Leptogorgia sarmentosa

Genomic Location: chr4:17414047...17422419
NR annotation: CAB3997425.1, tyrosine- kinase Btk29A isoform X1 [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ENSAPQT00000030775

ttcctAAGTTGTTTGGAATGGATATTCCTTAGCGGATTTCTTACTTTAAACTGTGTACAAACTTTGTTGTTTAGAACACTTGACTTAGAAATGTAAATATCAGCAATATTTCAAGAGAAAGATGTCTTAAATCAagtcatcatcatgccatttaGCGAGAGTGGCGACCGCGAACTGAAAGTTGATTTGATGTTGAAACGTTCTCAAGGGAAAAAGAAGATTTTGACAGCTATTAATTACAAGGAACGTGTGTTTGTTTTGACCCCTAAACAACTACAGTATTATGAAGGCACTAAAGAGAAACGTGGCAAACTAAAAGGTACAGTTGAGCTTATCAAAGTGAAAGCAATTGAAGCTGTCGATTATGGAGCATTTGATAAACAACATTGTTTTCAGGTGGTGTATCATGAGTACATTCTGTACATTATTGCGTACAGTCACCATCAGAAGTGTGAATGGATCGAGGCAATTCAATATGAATGCCGAAAGAACAAGTTTTTGTTGTCGAACTTTCATTCTGGGGCATACGTGAACAATCAATGGACGTGTTGTCTCAAACCGGAAAAGCAAGTTTCTGGTTGTCAGGAAACTTTTATTTCGAAGGAGAAAAAAGGAACTAGTTTTCAAGAAATGCCACTGCCAGACTTACCATCGAGAGGTACAACAAGTGAGGGTCCAAACGTCGTGGCTTTGTATAGTTTTAATGGACAGGAAAGTGACGATCTCAGTTTTGAAAAGGGAGATGAATTTACGATACTTGAAAGTGAAGGGGAACATTGGTGTTATGCTAGGGACAAATATGGGAGGAAAGGTTACATTCCAGTGAATTATGTGCGTCAAAAGGGAGGTTTAGGAACTGAAGTttGGTATTTTGGTGATATCATGAGACATGTAGCTGAGGAAATGTTACAAATGGAGGGAAAAGAGGGTTCCTTTCTTGTTCGGAATTCCAGCAAAGATGGCTTGTACACATTGTCCCTTCTTCATGGTGACACCGTTAAGCACTACCATATCAAACAAGATGAGAATAATTTTTATAAGATATCAGCGAGGCATTGTTTCCCCACTATTCCTGAACTTGTTGAGTATCATAAGTTAAACTGCGGAGGACTTGTCACCAGGTTACGGAATCCTCCAACTTCAGGCTCCACTCCTCCCACGGTTGGCTTAGGACACGACAAATGGGAAATTAATCGCTCTGAAATCCATCTTGGTGCCGAAATTGGAACTGGACAGTTTGGGCGTGTTTTCCGTGGTGTGTGGAAAGGTTCGATTGAAGTTGCAGTAAAGATGATGAAACCTGGGACAATGTCTGAGGAAGATTTTGTTGAAGAAGCTAAAATTATGAAACTTTTCCATCATCCTAATCTCGTGCAATTGTATGGAGTTTGCAGTGAGAAGCCAATTTATATTGTCACAGAATTTGTTCCAAATGGTTGTCTTTTAAACTATCTACGTAAGAAGCGTGAAATGGTACTACGTAAAATTTCCGTCACCTCAGAAATGGTTATACACGTCGCCTCTGCCATGGCTTATTTGGAAAgtaaaaatttcattcataGGGACTTGGCGGCGAGGAATTGTTTAGTTGGTATTAATAACATGGTTAAAGTTTGCGATTTTGGCCTTTCCCGGTTTGTTATTGATGATGAGTATACGGCGTCAGAAGGAACAAAATTTCCAATCAAATGGGCGGCTCCAGAAGTCATTATGTACAGTAAATTTAGCAGCAAATCTGATATCTGGGCTTATGGTATTTTGATGTGGGAAGTATTCAGCGCTGGAGCCTCTCCTTACGCTGCAATGGGGAATTCTCAAGTTGTTAATCATATAATGACTGGTAATCGATTAAAAAAGCCGGAAACCTGTCCAAGAGAGATCTATCGATTAATGCAGTCTTGCTGGCTACAGGAAGCAGATGACCGACCAGCGTTTGGGTTGATATTTAGAAAACTCAAAGAAATGCTTGGGGAAGATTATGCGGACACATTTGAATAGCAAAATGTGTGTTTTAATGTATTTAAACCTTAGATATGAGGAAAGTAAAAACATCACTCAATTGAAAACTCCAATTATAgttatttgtaaataaattaaactTGATTAATCTAAGTATTGTAGTTGTCAAAAAAATCGCTGAAAGGAGTCGTAGTGTAATGATAGTTTTCATCTTTATGGTCACATATTATAGTTTTCATCTCTAAGAGAGTGGTGTACACTTTGTTCGACAATGATTTCTTCTCGTGTAATTTTTATCACCGGCACAAtcgacctttttcgtaattaCAGTATGTCCCATCTCTCTTTAGCCTGACAGCCTCGTTCTCGTTATTAATTTCCATATCTTTATCCTTGAGAACGAGGTTCCAAGGCCTGGAGAGCATTCGTGCTATGATTGTCGAAAAGGTGTGTAAAGAACACCGCTGAAACACCTCAACGCAGTGAGCtctatatatatctggagcGAGGACAGTCATTTGGCCGATGAGAAAAGTGCGGCTAAAATGGAGGAAACGTGTATTCACTTTTGGGAGTCTGGGATTGCATGCATGCTATATATTCGATGTACGCTGTAATTCACTGGTTACAAAAATTACAAGTATTTTTTTACCGCTGTAGTTTTGACTGCGTATAGTTGAATCATTTCGTTTTTAGTTGAATTATCTCTCTTATCTTTATTTCACTACTTTCACGTTTCACTGCAGATATTAGTGATCCTGCTTGCCGTCCATGCTTCATTGGGCAAGTTGTCCTCCGACAGCCAAATAGTTGAATTAAAACTTTAgtaacaaatatatatgattTGAGTACATTGAATGATTATAATGCTTCGTAAAATATGAATTACATTGAGCACCTCCCC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q06187	Tyrosine-protein kinase BTK OS=Homo sapiens OX=9606 GN=BTK PE=1 SV=3
P35991	Tyrosine-protein kinase BTK OS=Mus musculus OX=10090 GN=Btk PE=1 SV=4
P42680	Tyrosine-protein kinase Tec OS=Homo sapiens OX=9606 GN=TEC PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000425 (this species only) · gene tree & orthology
Ubiquitin family	UBD\|Other\|SH3 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00779 all species →	BTK	BTK motif	Motif	Interproscan
PF00017 all species →	SH2	SH2 domain	Domain	Interproscan
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF00018 all species →	SH3_1	SH3 domain	Domain	Interproscan
PF00169 all species →	PH	PH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001562 all species →	Conserved_site	Zinc finger, Btk motif	Interproscan
IPR036860 all species →	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR000980 all species →	Domain	SH2 domain	Interproscan
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR050198 all species →	Family	Non-receptor tyrosine kinases involved in cell signaling	Interproscan
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR020635 all species →	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR008266 all species →	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24418 all species →	TYROSINE-PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0004713 all species →	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0004715 all species →	Molecular Function	non-membrane spanning protein tyrosine kinase activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07364	TEC; tyrosine-protein kinase Tec	EC:2.7.10.2	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.