Genomic Location: chr4:17883978...17892958
NR annotation: CAB3982732.1, cullin-3 isoform X2 [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families
| CDS |
| ENSAPQT00000031034 |
| Transcript |
| ENSAPQT00000031034 |
| Protein |
| ENSAPQP00000027734.1 |
| UniProt accession | Description |
|---|---|
| Q6DE95 | Cullin-3-A OS=Xenopus laevis OX=8355 GN=cul3a PE=1 SV=1 |
| Q6GPF3 | Cullin-3-B OS=Xenopus laevis OX=8355 GN=cul3b PE=1 SV=1 |
| B5DF89 | Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000557 (this species only) · gene tree & orthology |
| Ubiquitin family | E3|E3 adaptor Cullin RING|Cullin · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF10557 all species → | Cullin_Nedd8 | Cullin protein neddylation domain | Domain | Interproscan |
| PF00888 all species → | Cullin | Cullin family | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR016159 all species → | Homologous_superfamily | Cullin repeat-like-containing domain superfamily | Interproscan |
| IPR036388 all species → | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR016157 all species → | Conserved_site | Cullin, conserved site | Interproscan |
| IPR016158 all species → | Domain | Cullin homology domain | Interproscan |
| IPR019559 all species → | Domain | Cullin protein, neddylation domain | Interproscan |
| IPR045093 all species → | Family | Cullin | Interproscan |
| IPR001373 all species → | Domain | Cullin, N-terminal | Interproscan |
| IPR036390 all species → | Homologous_superfamily | Winged helix DNA-binding domain superfamily | Interproscan |
| IPR036317 all species → | Homologous_superfamily | Cullin homology domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11932 all species → | CULLIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0006511 all species → | Biological Process | ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0031461 all species → | Cellular Component | cullin-RING ubiquitin ligase complex | Interproscan |
| GO:0031625 all species → | Molecular Function | ubiquitin protein ligase binding | Interproscan |
| GO:0016567 all species → | Biological Process | protein ubiquitination | Interproscan |
| GO:0031463 all species → | Cellular Component | Cul3-RING ubiquitin ligase complex | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K03869 | CUL3; cullin 3 | - | DNA repair and recombination proteins | ko03400 | deepkoala |
