Gene detail

Detailed information of ENSAPQP00000027897.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028405545.1, sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Dendronephthya gigantea]
Species abbreviation LSARM · all data for this species · gene families

Sequence

CDS

ENSAPQT00000031216

ATGATGGATTCTCGTCTCCTGCTGTTGAGCGTTCTCTTCTCGCTGTTTTTCGGCGCACATAGTCAATGGTATTCCTCCAACAGGCAACGGTTAAATGCTTTTaaacaaagtttcaaaaatagTGAGTCcgacataattattttcatcgaTGTTTCGGGGAGTGTACGTCCGTATGGCTTCCGAACGGAAAAGTATTTTGTCACAAGCCTGCTGGACGAGTTTAGCGTTGCTGACTACTCAACGCGTGTCGCGATCATTACATTTGGTAAAAGAATCAAAACCGAATTGAATTACATCAACCTCAAATCGAGAGGATCTTCTGACGACACGACAAAAtgtgaatttaaaaaaatttttgaacacCAAGTCAAGTTCCGTAACGGACCATCTACAAATATGAAGGCCGCTTTTGAAACTGGTCTTAATTTGTTGCAACAAGCAGAAAATGATAACCATAAAAGACACAACGTGAATACAGTGGCTATGATGATCACTGACGGTGCTTGGAACGAAGGAGATCCTACATACGCAATTCGTCAGTTAAAGACCGGCCAGTTTAATGTTGATGTTTTCGCGGTCGGAGTTGGATACGCACGTCAGTGGCAACTACAAACTATTGCCTCAAGCAGCGATAAGGTCATCTACGCAAACAATTTCGCTCAATTCAAAGAACTCGCTAATTATATCAGAGGTGaCGCCCACGAACGTGTTTACTATAAAGTACAGGATGGAAGATGCTCTACACGATGTCATAAAGACGCTGTCTGCTCCTGTGGTACTGTGAGTGGAAGATACGTTTGTACTTGTAAAGCGGGATTTTCTGGAAATGGTATTAACTGTGAACGTAAGTATATTTTACCCTGCCCACTTGGCTCCTTCAAAGATTTCCCCTCACCGGACAAATGCACAGGATGTCCAAAGAATTCAAACACTAACAAAACTGGAAGTATTTCCATTTCGGCCTGTGGATGTAAAGCAGGATATGAAGGGAATcctaaaaaaaaaattgagtgTACAGCTGTGAAATGTCCGCCAATTGCGGCCCCCAAGTATGGTCGGATGTTTGGAGCAAAATGCCACGGATCCTACCAAGCAAAATGTTTCTTTGAATGCAATACTGGCTACTTACATTATGGTCCACGATACAGAGAATGTTTGTCAAATAGAAAATGGTCAGGGGAAGACGTTAGATGCGATGttCAACGATGCAATGATATCCCACCACTTCATCGTGGTACTGCCACCTGTACTGGATCAGAATTCCAAGATTCGTGTACTTTCCATTGTGATCGCGGTTATGAACGTATTGGCAGTGAAAAAAAGGTCTGTCAAGCTAACGGTCAATGGACTGGGTCGGATGTTGTTAAATGTGAAGCTAAGAAGTGCCCAGCATTACGAAAGTTGTCGTTTGGTACAGTTGAACCCGTTGATTGTGTGACACGTGCACAGAATTTCGGAGCAGGATGTATTTTCCGGTGTAGTAATGGATACACAATGCAAGGACAGGGTAACTTGGTGTGCAAAGAAGACGGTacctggtcacgtgatatacCAACTTGCACAgACAATGAGTCGCCACGAGTTATTTCATGCCCAAAAGATAAAGTCATTGCAACGAAACACGACAAAGTGGTTGTCAGCTGGGGGCCAGTTATATTTAAAGATAATGCTGGTGAGGATAAACTGACGATTATTGGATCTAAGAAAAATAACACTGAGCTTACGAGTGGTACCTATAACATCGCCTACACTGCAACAGATGGAAAAAATCCTCAAGCAAACTGTGTATTCACAGTAACAGTTACATGTAAGTATATCAGTTATATTTATACATTAATAACGCATtatttgtatttatataatatactctACACACAATTTTCgcatgaaattttttttcaaaatcattgtatcacctgtgtttttttatcaccTTGCTCCTTGCGCGTTTCAGCAATACCATGTAAATATTACCCACCACCAATCAATGGAGGTATCGCGTTGAAGCAATATTGGGGCGGACCAGCTGTCGTACCAAGTTGCAATAAAGGATATGACTTTGCTACCAAGCCTTCTTGGCTGTACCAATGTTTTGTTGATGGTACATGGCTATTGTTCCCTAACACCGACAAAATGCCATGGCCTGATTGTACAGTTGTCTACAACGCAGACGCTAGGAAAGGAATGGAATTCCAGTACTTCACTGGTGATTGTAGTGATCCTGCAGTCCAGCTAGAAGCAAAGAAAGCATTCTTGAGAGCTTTTGACCTTTTTCTACAAGACCAGTTCCCTGATTACTGTGACTTTGAACAGAGTTGTAAAGTCGAAAATGTTCAAGTTATATGTGGTCAGAAACAACCAATTGGAGGAGGCCGTAAACGTGGAGTCCAAGGGGTATATGTTACAAAAAAAGCCGAAGTGGAACCAAAACTGAAGCAATTGCAAGCTGACAAGCAAACATTAACATACGAACAACTTTTGGAGACACCTGCCGAAATTCAATGTCGAAACGGAAGTGTTTTTGGAATGAACGATTCCCCTTTAAAAAAAGCGAATGAAAAATGTCGTAATTGCGCTGCTGGCACATACTTTGATCCAAATCGGAACAAAGCTGAAAAATGTCAAGATTGCCCCAAGGACACTTATCAAGAACAAAGTGGCCGGTTTCATTGCAATAAATGTCCACAGGGAACATTTACGGATGGAACTAAGACTAAGAACGCTACTCACTGCAGAGCTGAGTGTCCTCCCGGAGAATATTCAGAAAACGGCCTTCAGAATTGCCTAGCCTGTCCCATTGGCTACTATCAACATATTCCGAGAAGTCGAAATTGTATTAAGTGCCCTGGGGCAACTACTACAACCAACGAAGCTGCAAAGTCAGTCAACGAATGTGGTGTTGTGTGTGCACGAGGATCGTTCTCAAAGACAGGCGTAGAACCATGTGAATTGTGTGCTGTGGGACATTATCAaagttattttaataaaaaggaATGTTCGCCCTGCCCTGCTGGTAAAACTACACGAGGAAAAGGAGCCGTCAGTAGCAATGAATGCCTAGCATTAAATCCCTGTGCATTGAAACCGTGTGCCAATGGGGGGAGTTGCCAGGCCACAGGTAACACTTACGAGTGTCGGTGTCTGCCGGGTTACCAAGGTGAAAACTGTGAATCTGAAATTAACGAATGCGAATCGAATCCTTGTTACCAGGGAGCTTCCTGTCTGGATAAGGTGAACGGTTACGTATGCGTGTGTCCTCCACAGCAAACGGGTAGACATTGTGACCAAAAAGTTGGCGCATTCTGCGCAAATAATGTTTGTATAAATGGCGGTGCTTGTATTGAAGAGCCAGACCGATTTGTCTGCAACTGCCAGCCTGGATTCACAGGAGTTTTCTGTGAAAGTGAAATAAATGTAAGTTATCACATACATTTGTTTAACAGCTTTTTACCATTTTTGTATTGGCAACTATCCAATATGTATATTGAATGCGCCTCGGTTCCATGTGAAAATGGTGGGAAATGTACGGACCAGCATCCGGGATATAGCTGTCAATGCTTGCCAGGATATAGCGGCGTTAACTGCCAGATTGTTGAAGATGGTTGCGCCAGCGATCCATACCTTGGAGTAGGTTCCAGTTCCTTGACGCTGAGAAATGAGATCACGAAATTCACTGTTGCATTCTGGATGAAAGTGGCTGAGATTGCCGGCGGTGACCCTGGCACACCTTTGTCTTATGCTGTTGAACATCAAGgAATCTTGTATGACAATGCCTTAACCATTCACGACTACTCTGGTTTTTATGTATCTATCAACAATGAGAGGTATACTACTGATGTGCCCGCTGATGATGGAAAATGGCATCATATTGCAGTCAGTTGGACAAGCGCGACTGGGCAAGTTCTATTTTATAAAGATGGAAGTCGTGATTGTCATTTGTCTGATCCTGCACGGCTATtcaccaatcaaattCCAATTCCTGGTGGTGGCGTGATGGTTCTCGGGCAAGAACAAGATATCGTAGGAGGAAATTTTACAGGTTCTGAAGCATTCTACGGTTCTATTAGTCAAATGAACGTTTGGGACTCAGTCGTGAGCGAAAATGAGATTCAACTACTAGCAAGTTCTTGTGCTTTGGATCGATATGGAAATTTAGTGGCGTGGGGAGATTTTCTCAATGGTATTGACGGCAACCTTCAGACGGTTCAACCTTCACAAGCGTGCCAAGAAAACCGATGCTGGAGCAACTGGGTAAACAACGATTATCCATCCTCTGGAAATGGTGATTCAGAAACAATATCTGATATTTGCTCAAACTCACGTGGTTACGACTGTCAGACAGTTGGTGGTTTATCCATGATTGATGTTGACTTGACCAAAAGCGTGTGTACTTCAAACGGAATCACGTGCGTCAATAATGACCAGGTTGcaatgaataaattatgtCCAGATTTCAAAGTTCGCTCCAACTGTCCTTGTTCAGAACTTGGTTGTGCAGATCCCAGACCGTTTGCGTACGGAAATGTCGTTGTTACAGGTTTTACTCCAGGCAGTGTTGCAACATTCACCTGCCCTTCAGGTTTCAAACGAATTGGTAGCAGTTCATTACATTGTGGTAGAGGTCAGTGGCTCGGGACGTTCCCACGATGTGTAGGTAAGGGATATTTCACTTTTAACATGAGTAATATAGCACCTCTCGGAACGCTCAATAATGTACGCTCTATGTACGTCCACTCATGCATTTCAGATATAAACGAATGTTCAAACAACAATGGTGGATGTCAAGGACAGTGTATTAACACTCAAGGAAGTTTCAGATGTATCTGCCCTCCTGGTTCAGGAACACAGCTTACCAGTGATGGATTAAAATGTGAAGatatcaatgaatgtgcaAGCAACAATGGAAGAGGTCCATGCGATCATTTCTGTACTAATTTGTACGGAAGATATCATTGCAGCTGCCGTTCTGGATTCACAGCTCGTGGGGACACATGCATTGcAACAAAATGTCCAAGCCTTTCAGCTCCACACAAAGGCCAAAAAGTTCCATTAGGCGACCTACGAGATATCGATGATGTCGTGACGTTCTCCTGTGGTCCAAACTTAAAATTGGTTGGTTCAAAAtcaagaaaatgtttggttGATGGAACTTGGTCCGGTGTCCAAGGCCATTGCGAGGAAATACTGTGTCATTCCGCGCCAACGATTTTGAATGGAAAACGATCTAGCAGCAACTCTCGCGCGGGTGATGTGATTACATACACGTGTAATCAGCCTGGTTATAAACTAGTGGGAAATTCTGAGTTGACATGCCAAAGAGATCAGAAATGGAGTCATCCTGCACCTAGATGCATAAGAACCGACTGTCCAGAACCACGGGCACCTATGGATGGTAAAGTTGTTGGTTCACAAAGCACCATTGGAGCTACCATACGTTATGAATGCAACATTGGTTACACTTTTGCTCCGAATACCGTTTCATATGCTCAATGTCAAGATAACAAACAATGGAGTAACCCTGCACCATCTTGCCATgttgTGAACTGCGGTGACCCCGGTAATGTGGTCGATGGCCAAAGGACTGGAAATAGCTTTACATACGGAAGTGTGGTGACGTATAAATGTAGCAATGGTTACCGTATCTCTGGGCCAGAGAGAAGAACATGCCAAGCAGATGGTACATGGAGCGGAGTATCTCCTAAATGTTCAAGTAGATCATGTGGTGACCCTGGTACCCCATCAAACGGTTTGAAGTTTGGTTTGGAATATACGTACGGAAAGAATGTGATATTCAAATGTGAAACTAACTACAGACTTGTTGGTGACGAAAAACGACAGTGTCAAACCAACGGAATCTGGAGTGGTGTCCAACCTACATGTGAAATTATAAATTGCGGAGATCCTGGTATTCCAACTAATGGCGAGCGAACTGGAAGCGGAACTAACGCTGGAAATGAATTAAACTATGAGTGTAAGCCTGGATTTAAATTGATTGGTGTACCAAAATTGGTTTGTAAGCAAGATGGAACTTGGTCAAATTCTACACCGACATGTGATGTTTCATCATGTGGAGGTGTGCTTCATGGTCCTTCTGGTTCCCTAAACTCTCCAAATTATCCCAACTTATATGAGAAAAACCAGTACTGTCGCTGGAAGATTTCCGTCCCAGTGAACAAGAAAGTTCTCATTCGTTTCAAGTCTCTTGATACAGAATACAAGAATGATTACGTCATTGTTTCGGATCCAAAAACCCAAACATTGATCACAGTTTTGTCTGGTATTAATCGCAATGAAATGGTATTTACATCATCTTCCAATGAGTTAGAAATCAAGTTTATTTCTAATGACGATCGAGAAAGTATTGGATTCGAAGCAACTTATGAGCAAGTCTCATGTGGTGGAATAATTACATCGTTGAATGACGTCATTCAGTCACCTTCCTACCCCAATAGCTATCCAAGTTCAGTAACCTGCGTGTGGGAAGTTGTTATCCCTGGTGAACAAATATCTTTGGAATTTGCTGATTTCGAAACACAAAATTCGTTTGATTTCTTGCAAGTTTACAACAGTGTTAATCAATTCAACGACGAATCATTCGTTGCGCGTTTCTCTGGTCACTGGAGACCAACACCTGTCATATCCACCAAGGGATATATGCATCTCGTTTTCAACACCAGCCCGAGAGTAAGTAAGAAAGGATTTAGAGCAGCAGTAGCCAAGTACAGAATAAACATTGGAAAATAA

Transcript

ENSAPQT00000031216

Protein

ENSAPQP00000027897.1

MMDSRLLLLSVLFSLFFGAHSQWYSSNRQRLNAFKQSFKNSESDIIIFIDVSGSVRPYGFRTEKYFVTSLLDEFSVADYSTRVAIITFGKRIKTELNYINLKSRGSSDDTTKCEFKKIFEHQVKFRNGPSTNMKAAFETGLNLLQQAENDNHKRHNVNTVAMMITDGAWNEGDPTYAIRQLKTGQFNVDVFAVGVGYARQWQLQTIASSSDKVIYANNFAQFKELANYIRGDAHERVYYKVQDGRCSTRCHKDAVCSCGTVSGRYVCTCKAGFSGNGINCERKYILPCPLGSFKDFPSPDKCTGCPKNSNTNKTGSISISACGCKAGYEGNPKKKIECTAVKCPPIAAPKYGRMFGAKCHGSYQAKCFFECNTGYLHYGPRYRECLSNRKWSGEDVRCDVQRCNDIPPLHRGTATCTGSEFQDSCTFHCDRGYERIGSEKKVCQANGQWTGSDVVKCEAKKCPALRKLSFGTVEPVDCVTRAQNFGAGCIFRCSNGYTMQGQGNLVCKEDGTWSRDIPTCTDNESPRVISCPKDKVIATKHDKVVVSWGPVIFKDNAGEDKLTIIGSKKNNTELTSGTYNIAYTATDGKNPQANCVFTVTVTCKYISYIYTLITHYLYLYNILYTQFSHEIFFQNHCITCVFLSPCSLRVSAIPCKYYPPPINGGIALKQYWGGPAVVPSCNKGYDFATKPSWLYQCFVDGTWLLFPNTDKMPWPDCTVVYNADARKGMEFQYFTGDCSDPAVQLEAKKAFLRAFDLFLQDQFPDYCDFEQSCKVENVQVICGQKQPIGGGRKRGVQGVYVTKKAEVEPKLKQLQADKQTLTYEQLLETPAEIQCRNGSVFGMNDSPLKKANEKCRNCAAGTYFDPNRNKAEKCQDCPKDTYQEQSGRFHCNKCPQGTFTDGTKTKNATHCRAECPPGEYSENGLQNCLACPIGYYQHIPRSRNCIKCPGATTTTNEAAKSVNECGVVCARGSFSKTGVEPCELCAVGHYQSYFNKKECSPCPAGKTTRGKGAVSSNECLALNPCALKPCANGGSCQATGNTYECRCLPGYQGENCESEINECESNPCYQGASCLDKVNGYVCVCPPQQTGRHCDQKVGAFCANNVCINGGACIEEPDRFVCNCQPGFTGVFCESEINVSYHIHLFNSFLPFLYWQLSNMYIECASVPCENGGKCTDQHPGYSCQCLPGYSGVNCQIVEDGCASDPYLGVGSSSLTLRNEITKFTVAFWMKVAEIAGGDPGTPLSYAVEHQGILYDNALTIHDYSGFYVSINNERYTTDVPADDGKWHHIAVSWTSATGQVLFYKDGSRDCHLSDPARLFTNQIPIPGGGVMVLGQEQDIVGGNFTGSEAFYGSISQMNVWDSVVSENEIQLLASSCALDRYGNLVAWGDFLNGIDGNLQTVQPSQACQENRCWSNWVNNDYPSSGNGDSETISDICSNSRGYDCQTVGGLSMIDVDLTKSVCTSNGITCVNNDQVAMNKLCPDFKVRSNCPCSELGCADPRPFAYGNVVVTGFTPGSVATFTCPSGFKRIGSSSLHCGRGQWLGTFPRCVGKGYFTFNMSNIAPLGTLNNVRSMYVHSCISDINECSNNNGGCQGQCINTQGSFRCICPPGSGTQLTSDGLKCEDINECASNNGRGPCDHFCTNLYGRYHCSCRSGFTARGDTCIATKCPSLSAPHKGQKVPLGDLRDIDDVVTFSCGPNLKLVGSKSRKCLVDGTWSGVQGHCEEILCHSAPTILNGKRSSSNSRAGDVITYTCNQPGYKLVGNSELTCQRDQKWSHPAPRCIRTDCPEPRAPMDGKVVGSQSTIGATIRYECNIGYTFAPNTVSYAQCQDNKQWSNPAPSCHVVNCGDPGNVVDGQRTGNSFTYGSVVTYKCSNGYRISGPERRTCQADGTWSGVSPKCSSRSCGDPGTPSNGLKFGLEYTYGKNVIFKCETNYRLVGDEKRQCQTNGIWSGVQPTCEIINCGDPGIPTNGERTGSGTNAGNELNYECKPGFKLIGVPKLVCKQDGTWSNSTPTCDVSSCGGVLHGPSGSLNSPNYPNLYEKNQYCRWKISVPVNKKVLIRFKSLDTEYKNDYVIVSDPKTQTLITVLSGINRNEMVFTSSSNELEIKFISNDDRESIGFEATYEQVSCGGIITSLNDVIQSPSYPNSYPSSVTCVWEVVIPGEQISLEFADFETQNSFDFLQVYNSVNQFNDESFVARFSGHWRPTPVISTKGYMHLVFNTSPRVSKKGFRAAVAKYRINIGK

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A0A1D5NSM8	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Danio rerio OX=7955 GN=svep1 PE=1 SV=1
A2AVA0	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Mus musculus OX=10090 GN=Svep1 PE=1 SV=1
P0C6B8	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Svep1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000589 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00084 all species →	Sushi	Sushi repeat (SCR repeat)	Domain	Interproscan
PF02494 all species →	HYR	HYR domain	Domain	Interproscan
PF13330 all species →	Mucin2_WxxW	Mucin-2 protein WxxW repeating region	Family	Interproscan
PF00092 all species →	VWA	von Willebrand factor type A domain	Domain	Interproscan
PF07645 all species →	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan
PF00431 all species →	CUB	CUB domain	Domain	Interproscan
PF07699 all species →	Ephrin_rec_like	Tyrosine-protein kinase ephrin type A/B receptor-like	Domain	Interproscan
PF00008 all species →	EGF	EGF-like domain	Domain	Interproscan
PF00354 all species →	Pentaxin	Pentaxin family	Domain	Interproscan
PF12661 all species →	hEGF	Human growth factor-like EGF	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002035 all species →	Domain	von Willebrand factor, type A	Interproscan
IPR000436 all species →	Domain	Sushi/SCR/CCP domain	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR003410 all species →	Domain	HYR domain	Interproscan
IPR025155 all species →	Domain	WxxW domain	Interproscan
IPR035976 all species →	Homologous_superfamily	Sushi/SCR/CCP superfamily	Interproscan
IPR000859 all species →	Domain	CUB domain	Interproscan
IPR000152 all species →	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR036465 all species →	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR049883 all species →	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan
IPR018097 all species →	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR009030 all species →	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR035914 all species →	Homologous_superfamily	Spermadhesin, CUB domain superfamily	Interproscan
IPR051277 all species →	Family	SEZ6/CSMD/C4BPB Neuronal & Immune Regulators	Interproscan
IPR011641 all species →	Domain	Tyrosine-protein kinase ephrin type A/B receptor-like	Interproscan
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan
IPR001759 all species →	Family	Pentraxin-related	Interproscan
IPR013032 all species →	Conserved_site	EGF-like, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45656 all species →	PROTEIN CBR-CLEC-78	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24469	SVEP1; sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.