Gene detail

Detailed information of ENSAPQP00000027984.1 in Leptogorgia sarmentosa

Genomic Location: :...
NR annotation: CAB3989731.1, calumenin isoform X2 [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSAPQT00000031322

AGCTGTAACATTTTGTGGGATTTGGAGAGAGGAAGATCTAGAAGCTGTTAATCCATTTCCCATTAATCGTAACTTTCATGtcattaaatgtataatattaaataaatacacCTGTTGTGTTGCTCATTGGGAATGTATATGATTTGTTTGCTTGTGTTCCAAAATGATAATTTCATCTTGCCTTACAATAAGATATTAGTTATAGCTATACAGTCACTATTTCAAGCATTAGTCTATACGAGGAAAGATAgcttcaatattttcattcatttttttatactcAGGAATTTTTAACGTTCATGGGtataattttgataaataataaaatgttcACCTTTCTATTACTTACGACCACGATAACTTTAATTACTGGCACCAAACAGTTTCATAAAATTAAACGATCAACTCCCCACGGCCACGACCTACACAAAGATCACGTGTCGTTTCTGGGTGAAGATGCTGCCAGGGAATTTTATGGATTAACACAGAAGGAATCTATCAGACGGCTTCGGATGCTAGTTCCTCGTATTGATATAAACAAAGACAGTTATGTCGATGAAGATGAATTAGTAATTTGGATACGTCACAAATTACAACCCTGGACGGTTCACGAAGATATTGACGCTATATATCATGATATTGACATTAACTATGATAACCAAATCACGTGGGATGAATACATGGAGAATGTTTTTGGATTCCGTGAAAGTGAAAAAGACAAGAAGTGGAGCAGAGAGAACCTGAATAAATACATCGAAGATGATCgtttaaaatggaaatttgCCGACAAGAACCAAGACAGAAATCTGACAAGAGAAGAATTTGAATTCTTTTACCATCCTAGAGAGCACGAAGCAATGAGTGAATACATTGCTGTGGTGGAAATTAACGAGCATGATAAAGACAACGACGGATTTTTGTCTTTGACTGAATATCTAGATTCCATCAATGCTCCAGCTTTTGCCGCTTTGGATACGAAAAAATTCCATGAAAATCTTGACCTCAATCACGACGGAAAACTAGACTTGAAAGAAGTTGAGATATGGAAAAAACCAAGAAGTTATGATAAAGCAGAAGACGAAGCTATACATCTCATGGGATATGCTGACGAAAATGGAGATGGCAAACTAAGTGTAGATGAATTTGCTGTAAATCATCACATTTTCGTTGGTAGCTATGGCACTCGTTTTGGGCAAGTTCTACATGACGAATTTTAGACTCAATAATTTATCTATTAATTAGATCTATGTTATTTACGATTATTTTATTAGAGGTGCTTTGTTAAATTCAATCAGGGGTAGATTGATTCTTTGCCGCGAAATGGACAAAAAAACTGGATGTGTAGTTGAAAGAACACAAGTTAAATAAACACTACAGATCAAGATGctttgtttgatatttattaatttgaacaaaaaGTGTTGTCAACTACTTTTCGCCTTCTTTCAAGTCAGCTTTGAGTTGTTTCTTTCCTCCTCTAATTCTTCCGGTACGACGAGCAGCAATGAGACCCACTTTGCGACCTGCTGACGCATCTCTTCTCATGGTGGAAGGTTTACCAATATGTTGATGGTTACCACCGCCGTGTGGATGTTCTACAGGCTGTAAGGAAATACGATGTGTGAGCCAGCAAATTCACTCTCCAAGTTCCCTCGCATTTATAGATCAAAATTAAGTTCTTTGTACGTTTTGGTGAagaaataattatagtttgtggaaacaccacatgtttttattattgcaaaaCTTTCGGAtcgtaagcccggatcttcacAAGTGCCAAAAGAGATTGAAAGCTTTGGAATAACAAAAATATGTGGTCTTTCTACAAACTATAaattgcaatttaaatttgtcagATACTTCTTTAATTAGAATTAAACCATTAATACGTTCAAACAATACATAATCCAGAAGAAAATATCCTCTAAATTGTTGATGGTAAGAGTAGCAGGCTGATTAAGCCATTTCTTTGgtgaataaaatttgaaagaagacTTGAAAGTAGAATATAACGATAAGTATATACTTACGTTCATAGCAACACCACGGACACGAGGCCAGCAGTTTCGCTTCACCTTGTATTTATGGTAAGCACGACCAGCTTTCAACATTGGCTTCTCAATACGACCACCACCAGCAACTATACCTACCAAGGCTCTGTTAGCTGATGGTACCACTCTCTTGATGCCAGATGGTAACTTTATACGCGTCTT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048	Domain	EF-hand domain	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10827	RETICULOCALBIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23901	CALU; calumenin	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala