Gene detail

Detailed information of ENSAPQP00000028398.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028413723.1, tropomodulin-2-like [Dendronephthya gigantea]
Species abbreviation LSARM · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9NYL9	Tropomodulin-3 OS=Homo sapiens OX=9606 GN=TMOD3 PE=1 SV=1
A0JNC0	Tropomodulin-1 OS=Bos taurus OX=9913 GN=TMOD1 PE=2 SV=1
P49813	Tropomodulin-1 OS=Mus musculus OX=10090 GN=Tmod1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002197 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03250 all species →	Tropomodulin	Tropomodulin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004934 all species →	Family	Tropomodulin	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10901 all species →	TROPOMODULIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005523 all species →	Molecular Function	tropomyosin binding	Interproscan
GO:0005856 all species →	Cellular Component	cytoskeleton	Interproscan
GO:0007015 all species →	Biological Process	actin filament organization	Interproscan
GO:0051694 all species →	Biological Process	pointed-end actin filament capping	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10370	TMOD; tropomodulin	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.