Gene detail

Detailed information of ENSAPQP00000028502.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028409382.1, laccase-3-like [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

ENSAPQT00000031903

ATGTTGATTTTACTTATCCTTATTATCGTTCCGTGTTTGGCACAAAATGACCCACAAGAATGTTTCAAAGACGCCAAATACATAACGTGTACACAAGTACATGGACGTCGGGATGCTTGTGATTGTACGAACACCGACCCTTGCTACATAAAGATGATTATCACCAAAACAAAGGATAAATCCGGCACGAAAACACTATACCTTGTCAACGGTACATTCCAAGGTCCAACAATCATAGCAGAAGAACGAGGAATTGTAGTGGTAGATGTTTTCAATGAAATGGACGAAGATACTTCCATACACTTCCACGGAATGCATCAACACAATGTCCCCTGGATTGATGGTGTGGGAAATATTACACAATATCCCATACCAGCCAATGGGAAGTTCAGATATATCTTCCGAGCATTTCCCCAAGGAACACATTGGTACCATTCTCACATGCGATATCAAAGAGACGAAGGGTTATTTGGTGCCCTGATAATACACGAATCAAAGAGCGATATTCACGAGAGGTTGGGTCCATTTATAGACGAACCAGCTAAGAAAACGTTGGCTTTACTAGAACAATTGGAGAATAAACATCCAGGTGGCAAATCAGACCCATTTTGTTTGCCGGACGGATCCGACCTTCCCATACAATACGACGATGTGACATTTTTCATGAATGGTAAACAAATTGCTGGACGCGTTCTGGGAGGTCGAGGCAATGAGAGTCATTCAGAATTTTATGTTGTTCCTGGAAAAAACTATCGTTTTCGAATCCTTGGGGCAACAAAATCTACCATTTTGATCGTTTCGATAGATTTTCACAAAATGCATGTTATTGCAACCGACGGTTACCTTGtgaataaatttgaaacaGATTTCCTTATCGTTCATGTTGGCGAGAGGTATGATTTCATTTTGGAGGCAAAGGAAGGCGTTCAGCCGGGAACTAAATATCCAATCAATATTCAGACGCTCGCGGTGAAATGCAACAATAACAGTAACCTAGCTGGGGAAAGCTTCGCGTTTGTTGTCTATACCGATGACAGTGAAAAGAGAGATATTCCTAAAACAATTACCCAGGAAAGTAATCGTTGCACCAACAAGTCATCCCCATGCAAGGTACTCAACTGTCCTTTTCAGATAATCCCAGATGATTTCAGTGACGTTGGTGCATATATGGATTGTTATAGTGTGGAATCTCTTCAGCTTCTCTACCCTACTCCAACTGCGCAAATTCCGAGTTCTAATAACGTCTCATCCCAAACATTCTTGAACTTTGTAGTACAGTGGCCTAAAGCATTGATCAACGGCGTGCAGTTCGATTTGCCCGATATTCCACTCGTTGAAAATAAAGGCCTTAAATATGAATGCAAGTACCCAGTGGCATGCGAGGCACCGGGAGAGAAATATTGTACACATGTAGTGTATTTAAACAAAGGAGATACCACAGCGAGATTTATTCTTTCAGCAATAACCAAAGGACAACAAGACCTTCCCAACTTGACACATCCAATTCATATGCACGGACACACATACTTCATTGCCAAGATTGGATACCCAGAATACTACGAGAACGGAACAATAAAGTCTCCAAACAAGGACTTAAATGTGCCTGCGTGCGGGCCAGCATCATGGCGTGATGCCACACCCGGAGAGATTTTGGTAAACAGCACTACAGTGCGTAAAGATGTTGTTATAATTCCCGCTGGAGGTTACGTCGTTTTTCATTTAATCACCGACAACCCAGGTTACTGGTTCATGCACTGTCATATTGACGAACATCTCAATCGCGGAATGGCAATAACAGTTGGCGAAGATCCTACATGCGCAAGCACCCCTCCTACTCCACTCTTCAATGAAACTGACGAGTTTTGCTTCGATGTTAAAACATTCATCAGAAAGGAGTTAGAGGCATCATGTCCAGCACCAACACCAACACCAACACCAACACCCTCACCCTCACCATCATCTGGACACTATTCGTCCATCAGTATAACATCCTTATTCGTGCAAATGTCTCTTCTTTCAACATTGGCTATCTTTCGCTTGATCTAA

Transcript

ENSAPQT00000031903

AATTGCTTGCTTTTGATATTGCTGAGAATGAGTTGCCGTTGAGTTTCTCAACCGGGCGCATTACTGAGCTGTGAAGGTGGCGAACTATTTTGTCGCGATATTAATCATATAAGAACGTGATTTTGAAAGGAAcgctaaaaatattttcgtttggaaaacattttgtcgAAATTTCGCGACGTAGAAAGATTTATTCTCTTTTGGGTGTGTTACTGAAGAGCACTTTATACTGAGGCTTCTCCTGTGCCCATGCATGCAAGTCATTGAACACGCGATTTGAATCATTCACGTCATAAGATATGTTGATTTTACTTATCCTTATTATCGTTCCGTGTTTGGCACAAAATGACCCACAAGAATGTTTCAAAGACGCCAAATACATAACGTGTACACAAGTACATGGACGTCGGGATGCTTGTGATTGTACGAACACCGACCCTTGCTACATAAAGATGATTATCACCAAAACAAAGGATAAATCCGGCACGAAAACACTATACCTTGTCAACGGTACATTCCAAGGTCCAACAATCATAGCAGAAGAACGAGGAATTGTAGTGGTAGATGTTTTCAATGAAATGGACGAAGATACTTCCATACACTTCCACGGAATGCATCAACACAATGTCCCCTGGATTGATGGTGTGGGAAATATTACACAATATCCCATACCAGCCAATGGGAAGTTCAGATATATCTTCCGAGCATTTCCCCAAGGAACACATTGGTACCATTCTCACATGCGATATCAAAGAGACGAAGGGTTATTTGGTGCCCTGATAATACACGAATCAAAGAGCGATATTCACGAGAGGTTGGGTCCATTTATAGACGAACCAGCTAAGAAAACGTTGGCTTTACTAGAACAATTGGAGAATAAACATCCAGGTGGCAAATCAGACCCATTTTGTTTGCCGGACGGATCCGACCTTCCCATACAATACGACGATGTGACATTTTTCATGAATGGTAAACAAATTGCTGGACGCGTTCTGGGAGGTCGAGGCAATGAGAGTCATTCAGAATTTTATGTTGTTCCTGGAAAAAACTATCGTTTTCGAATCCTTGGGGCAACAAAATCTACCATTTTGATCGTTTCGATAGATTTTCACAAAATGCATGTTATTGCAACCGACGGTTACCTTGtgaataaatttgaaacaGATTTCCTTATCGTTCATGTTGGCGAGAGGTATGATTTCATTTTGGAGGCAAAGGAAGGCGTTCAGCCGGGAACTAAATATCCAATCAATATTCAGACGCTCGCGGTGAAATGCAACAATAACAGTAACCTAGCTGGGGAAAGCTTCGCGTTTGTTGTCTATACCGATGACAGTGAAAAGAGAGATATTCCTAAAACAATTACCCAGGAAAGTAATCGTTGCACCAACAAGTCATCCCCATGCAAGGTACTCAACTGTCCTTTTCAGATAATCCCAGATGATTTCAGTGACGTTGGTGCATATATGGATTGTTATAGTGTGGAATCTCTTCAGCTTCTCTACCCTACTCCAACTGCGCAAATTCCGAGTTCTAATAACGTCTCATCCCAAACATTCTTGAACTTTGTAGTACAGTGGCCTAAAGCATTGATCAACGGCGTGCAGTTCGATTTGCCCGATATTCCACTCGTTGAAAATAAAGGCCTTAAATATGAATGCAAGTACCCAGTGGCATGCGAGGCACCGGGAGAGAAATATTGTACACATGTAGTGTATTTAAACAAAGGAGATACCACAGCGAGATTTATTCTTTCAGCAATAACCAAAGGACAACAAGACCTTCCCAACTTGACACATCCAATTCATATGCACGGACACACATACTTCATTGCCAAGATTGGATACCCAGAATACTACGAGAACGGAACAATAAAGTCTCCAAACAAGGACTTAAATGTGCCTGCGTGCGGGCCAGCATCATGGCGTGATGCCACACCCGGAGAGATTTTGGTAAACAGCACTACAGTGCGTAAAGATGTTGTTATAATTCCCGCTGGAGGTTACGTCGTTTTTCATTTAATCACCGACAACCCAGGTTACTGGTTCATGCACTGTCATATTGACGAACATCTCAATCGCGGAATGGCAATAACAGTTGGCGAAGATCCTACATGCGCAAGCACCCCTCCTACTCCACTCTTCAATGAAACTGACGAGTTTTGCTTCGATGTTAAAACATTCATCAGAAAGGAGTTAGAGGCATCATGTCCAGCACCAACACCAACACCAACACCAACACCCTCACCCTCACCATCATCTGGACACTATTCGTCCATCAGTATAACATCCTTATTCGTGCAAATGTCTCTTCTTTCAACATTGGCTATCTTTCGCTTGATCTAAGATTGGCAATATTATAATAAAGCACCAAGAAACTGATTGGAATGGATATTATTACTTTGGCGACTTTTTGTGAACTAGAAAATAATTAGTTTGATAAACACAAAAAGTAATTACTTACGACTAAAAAAACTGTAGTTGCACATAGTGTTTTTTgtaaaagttttttttattataataaataCTCTTAAAACAACTTTTTTACAACTTTCTTCTGTGAAAATTTCTTCTGTAAACAATTTcgtttttttatattatttgtttCTTATTTGTTTCACGGTACATAAATAACGTACAATTTGAAATACTATCGGTTTTTACTTAGCCAAACTGCACTTAATCCAAGAGCAAGACATCCGGCGACGAACGCAACAggaaaatatgtgaatttttcttgttttacgTTCGTGTTCGTCTTTTTAGAAATCAGGTCAGCTGGAGCATTCGGAACTTTTGTAGATATCTAGAAAGAATTTAGAGAGAGATGAGTCTTCTTCACCATTGATTTAAAACAATGGTGTCATTTACTGTGCAGTAACTATACTTAACAGCTGGAAGAATTTGGGCAAGTGTTGCAGATGGAACGCCACAAAGTCACTTTTGCCGAAGGTTCTCACGCGAAGATTGAAGAgtgattaaaaatcattttaatctCACCTAAACACTGAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A0A067XMP2	Oxydoreductase ptaK OS=Pestalotiopsis fici (strain W106-1 / CGMCC3.15140) OX=1229662 GN=ptaK PE=2 SV=2
Q96UM2	Laccase-3 (Fragment) OS=Botryotinia fuckeliana OX=40559 GN=lcc3 PE=3 SV=1
P56193	Laccase-1 OS=Thanatephorus cucumeris OX=107832 GN=LCC1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000747 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07732 all species →	Cu-oxidase_3	Multicopper oxidase	Domain	Interproscan
PF07731 all species →	Cu-oxidase_2	Multicopper oxidase	Domain	Interproscan
PF00394 all species →	Cu-oxidase	Multicopper oxidase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008972 all species →	Homologous_superfamily	Cupredoxin	Interproscan
IPR045087 all species →	Family	Multicopper oxidase	Interproscan
IPR011707 all species →	Domain	Multicopper oxidase-like, N-terminal	Interproscan
IPR011706 all species →	Domain	Multicopper oxidase, C-terminal	Interproscan
IPR001117 all species →	Domain	Multicopper oxidase, second cupredoxin domain	Interproscan
IPR002355 all species →	Binding_site	Multicopper oxidase, copper-binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11709 all species →	MULTI-COPPER OXIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0005507 all species →	Molecular Function	copper ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000028502.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.