Gene detail

Detailed information of ENSAPQP00000028583.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028402425.1, WW domain-binding protein 4-like [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000031988

GCTGTAAATGAGTAGGGCCTGTTTGCAGGTCAAGGGGTGAGTGGGCCTTCGTGGTCGTTTCGACTTTATTGTTGCGCAACAACCGTAATAGAATAGTTTATTTGCATTCACATTTGCACTTAATTCTACGCTTATGATCCACGATGCATTTCCGTAATGGAGGATATGCTTATTGTTTGTGCACTTCGCGACGTCAATTTCGTCATTGTCGATATATAACTCCAGGTCTAGCTTGTTTTAGTAGTTGCTGTCATATCAAGTAGAAGATGGTATTACTGTTCGTTTAATTCTCGGAATATATGCTAATCAATGCCTTTGCACAGTGGTTGTTTGTCTGGAATCACAAGTGTATACCTGACTGCTTGAGTAATGAGTATCAGTTATCTTGCGAACAATTGGACAAAAAACAGGCCGCATTGAAAGCGTACAAGAAAGATATtggttattcaaattattacAAGGAAAAGGACACAAAAAGTGAAACAAAACTTAAGCAAGAacatgaaaagaaagaaagttgcaggattgaaaatgttgttggtGCATCTACGTCTGGTGACTGGGCAGCGTACCAAACACCAGAGGGTTACTGGTATTATTTCAATAACCAGACTGGAGAGTCCAGATGGGATCCCccagaaaatttttcattctcCGACCAACAACAGATACAGCAGACGTCaggTGAACTGAGTTCCAGTCAACGGATTAATGAAGTGGTAAGAAATGACGAAGTTGTTGACCAGAACAAGGAAGAGAATAGTGAGTACAACAGTCCTTTTGGAAAGTGGGAAACTGTTGCCGTTTATGAAAGGAAAGCCGATTCAGCAACAAAACAAGAAGCTGTAGACGAACAAGAAAATGTAGACAAACAGGTGGAAGTCCCTGCTGCAAAATTCAAGGAAAAACAATTACCAGTCCCGGCGCAAAACAACTTGAGCGAGACAAACGTCACTTTTAAAAAGAGGAAAAGCAATCAGGAAAAAAAACGAAGCATAAGGCAAAGGACTGATGATTCATAGTCACCTCGGAGCGTGAACAGCAGAAATATTCTTCAAAAAACAACTGCATGAAAACAATCACTGGCAATTAATTGTTCTATCGTGGACAAAATAGTCAAATTGTGGTCCCTCTGCAATTTAATGATTTAGAATAAGAGTTTTtcatacaattttcacttgTAACGAACTCTGATCACATATTTGTGATTTCATGTATTCTGAAAATGTATAAAATTTATATCTATATGCACACATAGTGAAAACAATGCTCTATTATTGTTGACTTTTGATCCCTATCGTATATCAAAAATGAAACATGACGTCATGACAAGGGCTTCAAAAAGCTTAAAAGGCATTCCTTCAGGCTGGCCTTACGCAAGAAGACAAGGATACTTTTATATATAGAGTTGTTTTTCTGACATCAGCAACCACAAGCAGCACTTTTTGGTTTGGCCGAGTTCCTTGGTGGAAGCTAGTCTGTTGATGAGATacaatcaactatcatcttgaCTGCCAACCTGCAGATTATCTGAAGACCATGGGTCAAGCGCTGGCTGGTTGATTTGTTCTGTTTATGATATTATTCGCTGCCAGAAGTATTTAGAAATTGACAAGCCATATATTCGCCAACTATAAGTGCCGTTGTTGAATTCTTTTATAAAAAGTAGTAGTAGCTTTGGTATTTCTTCTATATCGAGTCCTTTCTTACAATGATATAACTTTCCTCTATTAATTCTGAATATAACAATGTCAAATATAAGGTGTGGTTTACCACTTACATCAGCAAGTCAATTACGGAATCACCTTGgcattgaaaacaatgttttgctatCAAAGAAAAGTAGTGGATACCTAGGATACCCAAAACTGAAATGACCGTGCAATTAGAGGATAAACGTTACTTCcagtttacaattttaatcAATTTTATTGCATGGTTCACCACAGAGTATTGAACAATATCGCAAGAAAACTATATGGTTGCATGTATGAGTGCATGCGCTGATTGCTGTGCTACTT

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006810 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00397 all species →	WW	WW domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001202 all species →	Domain	WW domain	Interproscan
IPR036020 all species →	Homologous_superfamily	WW domain superfamily	Interproscan
IPR040023 all species →	Family	WW domain-binding protein 4	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13173 all species →	WW DOMAIN BINDING PROTEIN 4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000398 all species →	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0008380 all species →	Biological Process	RNA splicing	Interproscan
GO:0071011 all species →	Cellular Component	precatalytic spliceosome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13220	WBP4, FBP21; WW domain-binding protein 4	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.