Gene detail

Detailed information of ENSAPQP00000028755.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028399298.1, transcription factor AP-2-epsilon-like isoform X2 [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000032174

AAGGCAACACTTTGAGTCTGATAAAATATGTCAGGATTATTGCAATAAATGATTGCAGTGCTTACTAAGACCAGCTGCAGTACACAAGAAGAAAGTACCTCTGTATATCTACCTCACCCTTCATTACCTTAACAAAGACCGCGCGTGGTGGACTGGGTGCAAGAACAAAGATGTTTGATGAAGTAGTCCTAGATATAGTAGATACAAGTATTTGGATGCAGTATGTCAAATTTGAATCGCTTCGTAGGCAATTACTATGAAAACATCAAGAGAGAAACGCGCAGGATGCTAAGAGATTCCAGCTACAATTCGATGATCGACGAAGCAATAATACCCAAAGAAGAAAGCACTTGGAGCCACGACGAGGAGCGCAGTCTTTCAGCTATGCCATGTGCGAGCACAACCACAAGCGTGAATTCGGCCACCTCTACTCTGAATTCTTGTTCCAGCGTTACCACTTCAGGACTTACTCTACAGCACCCGCAGGCCCACGATTTGCGGGACATCCTCGCAGGACAACTCCCGCCACAGACGAGTCCGTATTATGCGCCACAATTCCCTCCTCTTCACTACCAACAACCACAACAACGCTTCGACTTTGCGCATTCTatagatcattttcaacaaaCAACACCGTTTGGACAGACTGCGTCCGCGTATCatccacaacaacaacatccgACTCATCAACAAGCGAGCTCAAATACAAATCATAGATTGATGAGACAAAGAGAACAACTACAACGCCTTGACTCTACAGTTAGTCAATTTGCTCCTGACTTAGTAAATGGACATTTTCCACCGCATACACGAAGGCATGATCCTATGCGGCTGAGTATAAATGATCCTATGGATATTTTACCACCAGCGCAACTCAGTGGCCAGAGTACTCCACAGTCCCTCGAGGCTCCTTCGAGAATTCCGCGAGATGTCAAGTTCAGACTCGATGACGAAGACAGTAAAGACGACATTGATACAAATCTTCCTGTTCAACCTTCAGACGTATTTTGTTCGGTCCCAGGTCGATTATCACTGCTTAGTTCCACGTCCAAATATAAAGTGACAGTTGGAGAAATACGTCGAAGACTGTCGCACCCAGAATGTCTCAACGCATCGTTATTAGGAGGCGTGTTGAGAAGAGCAAAATCGAAGAATGGAGGTAAATGTTTACGAGAAAAACTAGAAAAAATTGGTCTGTCGTTGCCTGCCGGACGAAGGAAAGCTGCACAAGTCACTTTGTTGACATCATTAGTAGAagGCGAGGCAGCTCACTTAGCTGGAGATTTCGACTACGTCTGCGTATCCGAGTTTCCTACGCAAGCATTATCAGAACACGTAGCCAAAACACACAAAGAAACGACTGAATATGAAACAAGAAAGAATGCTATACTCGCTTGCAAACAAATAACCAAAGAACTGCAAGATGTTCTAGGTCAAGATCCTTATCCTACGAGTCGTCTATCTAACAGTACACTGCCAGAATCTGTTCTAAAAGGACTAACTCATTTTGGTCTGGTAACACATGGCTTCGGCACGCCCGCATTTAACGCAGCTTtaaattcctttcaaacatatCTCAACGAACTTTTAAAGTGCCACGACTCACttcataacaataataatgGCTATCAATCTGCCATGACTTCATCTAGAAGCCAAAGTTTAAAGAACGGTGATGTATAACATCAATAAGACCGACTGTATAGAATAAATGTTAAACATACCAATGTTTACTGGTACCCAAAcagaaatacagaaaaatCAGGTGTGCTGAAAGATcgattatatttttatatttgattttcCCATTTCTGTAATTCTCTAATTCAAAAATATCTGTGTCTAGATTATTCTGTATTTCTTTTTGGAGATATTAAAATGAATCTGTAAATCACGGTAGATCTTAGCAACCTTGTCGAGATATGAGGTGGAAACTTTAAAGTCTTGTAAACTTGCAAACGTTTGGAGTTTCCAGGCCACACCTCTCCGGAATGTATACCACTTTTTCTAGAGGGCAATTGAAGCAAGAACGTCTGAAATGATCTGTAAAATACTGtgaaagattttttcaaaCCTTGGTTCAGTCAGTTTGAATCATTCGTTATTATTAATCAGAGGAGGTTTGCTTATACAAACAATGAAAGGTTGTTTGAAAAGGTTGCATAAAAAATCGCGAACAAGATTTTAGAGATCATCGTAAACGTTCTTGAACATTTCTCCTTTGATCTCAGGGTTGCGTATATTTCAATCATGCCGTACTGAGTTACAGCAAAGTAAATCCTATTCTTAGATAAAGAGTATTTTTAAGTTAGTTTTTGTTAAATACGTTTTAAGTATTTATACGTAGATAAACTGTATTTAAACTACGGGAAATTGCGACACGAACATGTCACGTGTGCA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5RJ20	Transcription factor AP-2-delta OS=Danio rerio OX=7955 GN=tfap2d PE=2 SV=1
Q2T9K2	Transcription factor AP-2-epsilon OS=Xenopus laevis OX=8355 GN=tfap2e PE=2 SV=1
Q7Z6R9	Transcription factor AP-2-delta OS=Homo sapiens OX=9606 GN=TFAP2D PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004315 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03299 all species →	TF_AP-2	Transcription factor AP-2	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004979 all species →	Family	Transcription factor AP-2	Interproscan
IPR013854 all species →	Domain	Transcription factor AP-2, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10812 all species →	TRANSCRIPTION FACTOR AP-2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000977 all species →	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0042127 all species →	Biological Process	regulation of cell population proliferation	Interproscan
GO:0048856 all species →	Biological Process	anatomical structure development	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09176	TFAP2A_B; transcription factor AP-2 alpha/beta	-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.