Gene detail

Detailed information of ENSAPQP00000028809.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028401750.1, protein capicua homolog [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

ENSAPQT00000032232

ATGAGACGACGAGGTCACAAGACAGAAGCGCCCTTAGAAAGCAGTCAGGCTTCGAAGAGGTCAAGAACTGAGCACTCAGACTTTGTTGCTAAGGAACAGTTGAGCCCTGATTCGGAAAAGGTGTTGCCACGTAAAAGAAAACGGACTGGCACAGTAGAACTAAGAACGTCATCATGGAACAGTAGCAATGAACATGCCAATGTTTTAAACGAGGAAGGAGACTCCGACAGCACTCTTTCCGGTGATGAAAACGACACCAAATTTTCCGAAACTGGGACCAAAGTAAAACCTAGTACGGGAAGCTGTTCCGGAGAGAATTCCAGCTCCCCTCGGAAGCATTCCGTTACAGGTGGTCCTAGCACCCCACCAAAATACAAAAAAGGAGATGTCATTACAACGCAAAACGGAATCCGGAAGAAGTTCAATGGTAAACAGTGGCGGAGGCTGTGCTCGAGAGACTTTTGCAACAAAGAGTCCCAGCGGAGAGGGTTTTGCTCGAGGCATTTGTCTATGAAAGGAAAATCGCTTCGGTCAAATTCGGCCATTCCCGGTGAGCGTCGGGGTAAACTTGTGAAAGAAGGAGGGATCGAATGGGAATCCGGTGGAGAAAGTGACAGCAGCATCCAGCGTGAATGCGACAGGAGCAGCAGTTTCGACAGTGATATAAAAGACATGGAGACGGAAGCCGCCATGAGTCTTGTGTCGCTCGGCTCCCGAGGACCTACCCCGTTTTCTGCACTGAGTACTCCTTTACCTTTCTCGGGTTCGTCTAAGACTCCATCCCCCTTCGGTACTCACGGAACGTTTTTCGAAAATGAAAATGGCTCTGTCACACCTCATCCGATTATGAACTCCACTCCAACTAAAAGCTTCGTGAATCAGGTGGCAACAAAAATAGGGCATTTAACTAGCGGCGAGTACCATCACAACCACCTGGCGATTAGTCCCGACTCAGGTATCCAGGTGAGGGATGATAGAGGGAGCTTTAACAATACCCCATCTATGATGTCACCTGCGCCTATTGTATCACCCTGCACGCCGACAAGGAAAATGTCCTTTTCGCCAATAGCCGGCGTCAGTAGTAGAACTGCCTCGCCAGGCTTACCCACTCCGCCTGCAATAAGGGGCAAGAGATGCTTTGTAGCCCCCAATTTACCTGCCCCTTCAGCCTTGACCCCACCGCCTGGTAATAAGGTTATGTATTCACCTGCCCCACAGCCACTACCGGTTACCTCCTCTAGCCTTTTCACCCCCTACACACAAACAAGCACGACAAAGTCAACGTACGGAAGGACCTTCCAGAGCAACCTAAGTGCTTCTGTGCCAAGTGCTCTCGAAAGAATACCAGATGTGAAGCTAAGAGACCACAGCAGTAAACATACGACAAAGACCGAAACCCTATCAACTCAAGAAGGCAAACCAACTGTTCGCATTGGAGCGTTTACAACTCCGTTGTACCCATGGCAAGCCATATTGCCTGTCTTGATGTTTTCCGAGTCTCAAGATAGCAACAAGAACACAAGTAATGTTGCTGAAAGTAAAGCAACAAGCAATGGTGGCGAGTCATTCGATGGCAAGCGGGAGCAGCCGCAGAAGACAGTATCTTGCTGGACTGTGATGAGCGATTCTCATGGTAACTACATGAAAGATGATCACCGAAGTAATAATGACACTGGCGAAACGTCGGatgaaattgatgaaaatttaCCATCACCGATAAAGGTAAGAATTTACAAACATATCCGTCGCCCAATGAATGCTTTCATGATATTTAGCAAGAGACATCGTGCTATAGTGCACGAACAGAATCCCCATCAAGACAACAGGACTGTTAGCAAGATACTAGGGGAATGGTGGTATGCGTTGAGCGCAAACGACAAGCAGGAGTATCAAAATTTAGCACACCAGGTTAAAGAAGCCCATTACAGAAAACACCCTGAATGGAAGTGGTGCagcaaagaaaaaaagaaagttgCGAGAAAAGGTGAACGAAGGTCTTCAATCACGGAAGACCTTCTGACTGAAAATGTCGATAAGGACTTGGAATTGGCTGATCGAACGAACAGCATGCGATCAAAAAGTGTCCCGGCGAATGAGCTCCGAGGAAGGGCATTTGTTGCTGAAGAGTTTTCATCTTTATTACCTAGAGACTCGCTTTCACAGTTGGCAAAGGTGATTATGTTTCATGACACTTCTTGCGCGATTGTTACTGGAACTTTTACTATTAGGTCATTAATCTTTATTTCcttttgttttaatattgTCCATTATTGCTGTCCAGTCATATTCAGATTGTTTTTAGGTGATGAGTTAGGAGAGTCTGATGCCGATGATGAAATTATGGAAAATAAGCGTTTTCCACAACAAAGATTTTCACCTATTCGCCCGAGAAGTGCAACGCCAAAGAGAGGACGTTATTTTTCGCCCATTCCAGTTAGCCGACCGTGGACACCTGATTTTAAAGCGCACCACAGATCTTTATTTCATGCGACCACTGATGCGCTTGCAAAGTACAAAAGTTCGTCAACGTCACAGCAGCGGAACTATTCACCAGCCTTAGCTGGTACCAAAATGAAATCACCTTCGCTACTGCTTCAGACGGGGCGGACAAGCGCATTTACAAGTATCGAGTCCAACAGGACAGCAGCAACAGGGGAGGGCGGCAACTCATCATCTTCCGCTGAAAACAACAATGTGGTTAAGACTTTACCTCAAATTAGCAGTGGTGAAGCTCTACTATCTGCCTCTCTTGCTCAACGTGCAACATCGTCGTGGTCAATGCCAGCCAGGACGGCGTTTCAAACGAAGCCATTGCAAATGATGACGCAACACCCTACATCTTGTAGTACTGCAAACAGAACAGTGGCCGAAATGTCGAATTCAGATAAGTTACCGATGGCGGATGCACAATTTGCACGAAGTATACCACAGTTTGTTTACACCTCTGATAACAATGTCCGCATTGACGGTGCTTCATTCACTAGCCAAGCCTTGCCGTACCATCATCAAATCCCACCTGGTTCGTACCTTTCTCCATTTGTCGCTTTTCCCTACCCCGGATTGCATCTTCAAGATAAAGTGATGTCTCCATTTGGTGTACATGCTTTACCTAGCCAGCTTCCCGGCAGTCCGACAGCCCTGCTTCGACCAAACCCTGTTGTTAATACCCTCATTTCTCCTGTGCTGAATATTCAAGTGCAATCATCAGCATCCTCAGGTCATGCAGCACTTCCGGCTAATGGTGTTCAAAATCGTTCTGAAAAATTACTAACAACATCTGTAACTGGTAGTCACTATCAAGGTGCTGACACAACAATTAAATCGGACGGAGTGAAAAAGCAGCATTCCCAAAGCCCGGCGATGTTGTCCGAAACATCCACCACGCGAAAGGACAATAAAATACCTGCTCAGAAAGAAGGAAAGGCCACAAAGAATATTCTCAAAAAATACGTTGCTGATGGGATGGAACAGGTACTTTCTGAAGTAAATTTCGAGAAACGTTTTGCAGAACTACCGGAATACACGCCAAAGTTACCTGCGGCAAACGTTGATAATCCGTCAAAAGAAAAGGATGACTCGAAACAAGGATTTACCTCGGCTACTTTGAACGCCAGTGCGAGTTCTTCCCCTGCTGGTAAATCTTGGAAAACAAACAACGATAGCCTTGACGCGCTCGCGGAAGCCGCTGCAGGAGTAGGCAGCAACCAAGAGGGACCAGCCAGCAATGGTCTAAAACGAAACATGGATTACAAGAGACTCTTAGTTCAACAGTTTCTTCACGAACACGGATTATTTCCCACGGAAAAAGAGACTAATGACTTTCTGGTCGAGCACAATGATGTATTTCCTAGCAAATCAAGCTTGCAACTGAAAATCCGTGAGGTCCGTCAAAAATGTATGCAAAGGTAA

Transcript

ENSAPQT00000032232

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q924A2	Protein capicua homolog OS=Mus musculus OX=10090 GN=Cic PE=1 SV=2
Q96RK0	Protein capicua homolog OS=Homo sapiens OX=9606 GN=CIC PE=1 SV=3
Q9U1H0	Putative transcription factor capicua OS=Drosophila melanogaster OX=7227 GN=cic PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003655 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00505 all species →	HMG_box	HMG (high mobility group) box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009071 all species →	Domain	High mobility group box domain	Interproscan
IPR036910 all species →	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR052412 all species →	Family	Cell Cycle and Developmental Transcription Regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13059 all species →	HMG-BOX TRANSCRIPTION FACTOR BBX	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000977 all species →	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000028809.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.