Gene detail

Detailed information of ENSAPQP00000028839.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028400199.1, DNA polymerase beta-like [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q27958	DNA polymerase beta OS=Bos taurus OX=9913 GN=POLB PE=2 SV=3
P06746	DNA polymerase beta OS=Homo sapiens OX=9606 GN=POLB PE=1 SV=3
Q8K409	DNA polymerase beta OS=Mus musculus OX=10090 GN=Polb PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001983 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14716 all species →	HHH_8	Helix-hairpin-helix domain	Domain	Interproscan
PF10391 all species →	DNA_pol_lambd_f	Fingers domain of DNA polymerase lambda	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022312 all species →	Family	DNA polymerase family X	Interproscan
IPR003583 all species →	Domain	Helix-hairpin-helix DNA-binding motif, class 1	Interproscan
IPR002054 all species →	Domain	DNA-directed DNA polymerase X	Interproscan
IPR010996 all species →	Domain	DNA polymerase beta-like, N-terminal domain	Interproscan
IPR027421 all species →	Homologous_superfamily	DNA polymerase lambda lyase domain superfamily	Interproscan
IPR002008 all species →	Family	DNA polymerase family X, beta-like	Interproscan
IPR018944 all species →	Domain	DNA polymerase lambda, fingers domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11276 all species →	DNA POLYMERASE TYPE-X FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003887 all species →	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0006284 all species →	Biological Process	base-excision repair	Interproscan
GO:0006303 all species →	Biological Process	double-strand break repair via nonhomologous end joining	Interproscan
GO:0034061 all species →	Molecular Function	DNA polymerase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000028839.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.