Gene detail

Detailed information of ENSAPQP00000029017.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028394304.1, uncharacterized protein LOC114518497 [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000032466

AATGCATTATTGATCCATTTCCATGCATGTTCGTTGCTGAAGATCACCTGTCCAATTCTTTCGCTCCTGCTGTTGCATGTATGAGTGCAAAATTTACGACTGACGAATAGATAGAAAATACTATCACGCCTTGAAATCAAAGCTTTATCGTGGTATTCTATACAGGAAGTATAGAATAACTGTGGAATTGTTGTCCTTCTCACTGTGAGAGTTCCATAACAAGCACATGTTGACAAAATGGAGTTGTCAAACAAAGTGACGATATAACACGACTAGTGGCTACTACATCACTACTAAGCATGGATATGCCCGAGGAAAATAAACTTGGGCGAAGCGATGTCTACAATAACTTCATCATCAAAAAACCGTACGGCGAGGAAGGTATTGGTTTTTATCCGACAGAAACGATAGTGCTCAGCAGATCCGAAATATGGTATTcgaaccctaaccctaaccctaaaccTAACcataaccctaaccctaacccaaaccctaaccctaaccctataCCGAAAGGATTTCGCGGTGTTTACAGGAATAAAGCACATGAAAATCATGCAGAATGGAAATTTATTGAGGCTCTTAAAGCTCAAATCTGTGAACTACAACGGAGTGAGGTCAGCGTTAAAGAGATCATAGTGAATCTCGTTCAAAACTACTCCCCTTGCCCCTCTTGCGTCGAAGAGATCATCGCCTTCATGAAAACGAACAACATTCAGTCCTCTTGGACAATAAAGTTTGCaaacttttataaaatttattataacCGAGAAAACAAGgaatggaaaaaattatcgGAAGACTGCATACTTGGGTTAGTAAAACTTCGGAAAAACGGCGTAAAACTTGAGTTATTAAGAGGTGAAAAAAACTGGGAAAAGTTCTTCGATGAGTACGTGGACCCGAATGTGAGAACTAAAGGTTTACAAGAAGCAATTTctgatgaaagaaaagaaagagaaGATGACGACAAAGACATCAATGACTACATAAACACCCTGGCTTCAGCAGGAAAGGATGGCGCAAATACCGAAGAAGTTGCCGGGGAATTGAAAGAAGATGGCAAGAAATCAAAAGAAGATGGCGGGGAATCAGAAGAAGATGGCAAGAAATCAGAAGAAGATGGCAAGGAATCAGAAGAAGATGGCGGGGAATCAAAAGAAGATGGCGGGGAATCAGAAGAAGATGGCAAGGAATCAAAAAAAGATGGTGGGGAATTAGAAAAGGTGGAGAAGAAGATGCCCAATCTTAAATTAACTGACGACTGATCGTCtaaaaacatttcagcaatcaaaattctttatatattagatagatatttgaaaaataggtCGAGTCATTCAGGAAGTGGCGCTGCTATAATGGACAATAGCTTCAATCGATTACAGTATTTCTTGCAAGCTCTTCTAAAATTATCTCGTATCGATAGATCGGCCTCTCCCGCAGCTAAACCAGACATATTTGGGTAGCATCTGCACATGCAGTAAAGGGATTTTACAGTTAAACAGAGTGACTTTCAAAGTTGTAATTGTTTATTTACTACTTTACAAATACGTACAGTCACATAGAAAGTCGCATTTGCAGGGTGTATATAAGCATAAACGTAATTGAGCAGAACCCAAAGCAGGTCGGCTCTATCTTTCGATGCTACACTGCATCAAGATGCATCAAATGAGCTTACGCTGCTTGTGATTTAAAATGTATGATTCCTCATTCATGGACGGGATaagttattcatatattttgcatattgATATTCTTGATGCTGCCACGCTTTGTGGGCTTCCTGAAAGATACGAAATTTCTGACTTtcacatttcacttttttAACTTAATGCCTGTTTCAACACAACTATGTTAATCGAGagaataacaaaatttttaaaatactttctCATAGCAGGAGGTTTCACAAAATTTCCATAAGAACAGAACAAAGAAATTCCTCACAGCGAGATGTCTCGATAGGTGGTCTCGTAATTTTTGAAGTATTCTTaagaaacatttaaaaattgcaACCTGTAAGTTCGggattttgaaattgttttcttttgaccAACGAACTATTTATTATAGGTGAAAATGATCAATTGCGGAGAAAGATTTCGATCGATTATTTGGTGAATCGGTATAGACTATACAGAGTATATATAGACTTTATATTGGCGAAATAAGTTTGTATGTATGTGCATTGTATTTGTATGCAAAACAGTTGAGTGGACAGATACTTACAGCAAGTGGAATGTTTTCATTCAATATTTCGCACA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010020 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18750 all species →	SNAD4	Secreted Novel AID/APOBEC-like Deaminase 4	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016192 all species →	Binding_site	APOBEC/CMP deaminase, zinc-binding	Interproscan

PANTHER

No PANTHER signature was detected for ENSAPQP00000029017.1. This gene does have a gene model — the search simply returned no hit.

Gene Ontology

GO term	Category	Description	Source
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09355	PBX1; pre-B-cell leukemia transcription factor 1	-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.