Gene detail

Detailed information of ENSAPQP00000029151.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028409110.1, GDP-L-fucose synthase-like [Dendronephthya gigantea]
Species abbreviation LSARM · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000032614

tcaaAGCACAGAAGTAGGTGGTATAAAACGACAAGGCTTTTTGTATCTATATGTATTGCATGCTCATGTATGTCTAAAAATGTTACGTAATTACCGCGTTTATTCAATCAGTTAGATAAGAATAATAAGATAAACGactgaataaatattattgataCTGAACACCCACTGAATACGCCGAATCAAATTAAATCTCTAAATAAATTAGGCACAATTTATATAGAAATGACACGTGTCATTGATCTTTGATGTATGTACCATAATTATGTAAGATGGTAACCCTAATTAGGTACATCTATGAAAATCATGTCTGGTAAAAAGGTGATTATGGTGACAGGAGGCACAGGGTTGGTTGGTCACGCGGTCAGGGTGATTGCAGAGTCGGAAGAAAAACGGGAGAATGAACAATGGGTATTTCTGTCGTCAAAAGATGGTGACTTGAGTAATATAGATGCTACAAAAGCAATATTTGAAAAGTACAAACCAACTCATATTATTCATCTGGCTGCAATGGTTGGAGGACTGTTTAAAAACCTAAAATATAACCTTGATTTCCTTAGACAGAATATTCTTATAAATGACAATGTTTTGCAATGTGCTTATGAATACAAGGTTGAAAAATGTGTGTCGTGTCTTTCCACATGTGTATTCCCAGACAAGACAACTTACCCTATAGATGAAACAATGGTTCACAATGGTCCCCCTCATGATTCAAACTTTGGATACTCCTATGCCAAACGTTTGATTGATATACAAAATAAGGCATACCATACACAACATGGCTGTAATTTCACCAGTGTCATTCCTACAAATGTGTTTGGGCCTCatgataattttaatttggaaGATGGTCATGTTATTCCTGGTTtgataaacaaaatttatcatgcaaaAAaGGAAGGAAAACCCTTTCAAGTTTGGGGAACAGGAAAACCAAGACGGCAATTTATTTACTCCCTGGACCTCGCTAGACTAATGATCTGGGCATTGCGAGAGTACAATGAAACCTCACCAATCATTTTGTCTGTTGGTGAGGAAGATGAAGTATCTATCAAAGAAGCTGTTGAAATGATAGTGGATGCTATGGAGTTTAAAGGAGAATTAACATATGATACAAGTAAGTCTGATGGTCAGTTCAAGAAAACTGCCAGCAATGAAAAATTGAGGAAATACCGACCCAATTTTAAATTCACTGATATCAACCAAGcGCTACGCGAAACCTGCCAATGGTTTGAAGCAAATTATGAAACGGCAAGAAAATGAACACTTAGTCATTGATCAATTGATCTTCCCTGAATTGATTAGATAAATGGGCATATACATTTTCCTTATTTATAAGCATGAATTGAGGGCTTATTTATAAACTGTATTGTGAACATACTTTAGTAGCAAAAGTCCACTGAAATTAGTAGGCATGCATCTATGCTTTGAGGATACAGCTGTAATACTTAGACAACACATACTGCATGTacgtaaaaaatgaaataaatgacTTAGAGTCAAAATAACACAAGCTTCTATGAAGCTTTATTTTCAACTCTAAAAACTGTTCAGGATatgtaaaattatataaactacACCATGTTTGCATTTCTGCTTTTAAATGTTACTTAGACTCAACAGGTGGGAATCTTTAAATGCAGTGCTTGGCCAAGCTGGATATTTCTGTTAATATTTTGGGAATATTTTCTGCTTCAATTGTCAATGTTTTGCTTGACAAATGACCACAAAAAATGGCATGTTATATGCAATGAGAATTTTAGGCTAAATTTTCAGCAAGTTATTTATGCAAGTATTCACTTTTTCTGATGGATAGTTATTCACACAACATGCTAACCTGTTACATCATGGCTGATCAGGTGTGTCATACTCCTCCTCAGGCTCTTGTGTCTTCTGCTCTGCATCTTTGGCATTTGGTACCCACAGTCCTGAATCTACACATCGTTTAAGATGATACCTTGCTTCTTCTTCAGGAAGTTCTCCCAAAACTTTTTGAAGCATGGGAATGTCTTTCTTGTCAAAACATTCCTGTACAGCCTGAAACCATGTAAAAATCACTTATTTGTTTCTTGCATGTGAGTTGGCTGAAGATGGCTTTTACTTACTGCAGGTAATGACTCAAATACTTCAACTGGATCCAGTCCTCCAGGACCAAGTCTCTGCTCGCGTTCTAATCTTTCCTCCTGAATCAAGAACATGTAGTTGTC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8K3X2	GDP-L-fucose synthase OS=Cricetulus griseus OX=10029 GN=GFUS PE=2 SV=1
Q13630	GDP-L-fucose synthase OS=Homo sapiens OX=9606 GN=GFUS PE=1 SV=1
Q5RBE5	GDP-L-fucose synthase OS=Pongo abelii OX=9601 GN=GFUS PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003097 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01370 all species →	Epimerase	NAD dependent epimerase/dehydratase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR001509 all species →	Domain	NAD-dependent epimerase/dehydratase	Interproscan
IPR028614 all species →	Family	GDP-L-fucose synthase/GDP-L-colitose synthase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43238 all species →	GDP-L-FUCOSE SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0050577 all species →	Molecular Function	GDP-L-fucose synthase activity	Interproscan
GO:0009226 all species →	Biological Process	nucleotide-sugar biosynthetic process	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02377	TSTA3, fcl; GDP-L-fucose synthase	EC:1.1.1.271	O-Antigen nucleotide sugar biosynthesis	ko00541	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.