Gene detail

Detailed information of ENSAPQP00000029438.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB4025061.1, NHL repeat-containing 2 [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

ENSAPQT00000032922

ATGAGCAGTAAAGATCAACTATTTTTGTTAAGACTGGAGAGTTGCGAAGACAAGGAAGAGAGGCATGGTTTAATTCAAGACTATTTGAAAACGTTTGGCGAGAACGCGGCTGGGAACGTCAAAAAAGTGCCAGATTTTCCCGAAGGGTCAGAATGGCTGAACTTGGAGAACAACGAATCCTTGTCCATAAATGGGAATTTAAGAGGAAAAATTTGTGTGCTAGACTTTTTCACGTACTGCTGTATAAATTGTATGCATATTTTACCGGATCTACATGCGCTTGAAGCAAAACACAGTGTAGAAGATGGCTTAGTTGTTGTCGGTGTACATTCAGCAAAGTTTGAAAACGAGAAAGTCTCAGCAAATATACTCAATGCTATTTTAAGATATGACATCACCCATCCTGTGGTAAATGATGCCAATGCGTTGATGTGGAATGCTATGGAGATCGCATGTTGGCCGACGTTAGTTGTCGTCGGACCAAAGGGGCAACAATTGTTGTCGTTGGTTGGGGAAGGTCATCGAGACACTTTGATGGAGTTTGTGGATGCTGCATTAAAATGGTTCACATCTGCTGGTGAAATAAAAAACCACTCAATCAATGTGAGTCTAGCAAAGGACAACATTCCTAAAACATGTTTGTCATTTCCTGGTAAGTTGTCCGTCAAGAATTCGGGTGGCAAACTGGCCATTTCGGACACAAGCCATCATCGGATATTGGTCGTGGATATGAATGGTGTTGTTGAAACCACAGTGGGCAGTGGGGTTGCAGGACTGGCAGATGGTGGATTTCAAGAGGCACAGTTTAATAGTCCCCAAGGTGTGACCTGGAAAGGCGATGACATGCTGTTTGTTGCTGATACCGAAAATCATGCAATACGAATGATTGATTTAAAGGCAAAATTAGTTACAACAGTTGCTGGGACAGGCGTACAGGGCAATGATAAAGTTGGCGGGAAAATCGGCCAAGATCAAGAAATTAGTTCACCATGGGATGTCGTCGTTGGCCCGTCACCAGGTTCGCTGAACATCTTAGAAGATGAAAGTGTGTTGTACATTGCAATGGCTGGCACGCATCAAATTTGGGGATTGTGTTTGGCCGACGCGAAGTGGTTGAAACGAAGTGATGAAAAAGCGTGGACGTGCCTGCGGTTTTCGGGCAGCGGGGCGGAAGAAAACCGTAACAACAGCTACCCACATAAAACTGGTTTCGCTCAGCCATCTGGTCTGAGTATTGTCCGAGAGAAACCTCTGGAATGTGTGTTTGTAGCGGACAGCGAGAGCAGCAGCGTGCGTTCTGTGTCCATTACTACAGGCGGAGCGAAGGCTACCGTTGGCGCTGAAAGAGATCCAATGAATCTCTTTGCATTTGGAGATGCCGACGGGGCAGGTGTGGATGCGAAGTTACAGCATCCCCTCGCAGTCTCGTGGAACTCCCACAACCAACTTCTCTACGTTGCAGATTCCTATAACCATAAAATCAAAGTGGTTGATCCTGTCAAAAAGACCTGTGCTACGTTCTTGGGAACAGGAAAGCCAGGATGTGTGGACGGTGATATTGAGCGTGCGCAGTTTAATGAACCTGGTGGCATGGACACCAGTCCTGACGGAAGCACGCTGTACGTGGCCGACACAAACAGTCATGCCATACGTGTGGTGGATTTGAAAACTAAAACCGTTTCCAGCGTGAGTGACGCGGGCCGGAAGGCGCGCACGGAGGTCACAGACGGAGCTACGGACTCAACCGACAGTTCTGCGGATGCTGCCGAGAAATACCGACGGCTTGCACCGCTTAACGCGAAGACCATAGATTGCAAACCCGCGGTTCTTAGCGAGAAATCACTGGAGATCCAGTTTACGTTTGGTCTGCCAGAACAATGCAAGCTAACAGAGGGAGTGAAAAGCCGATGGCAATGTGCTTTATTTGAAGACTCCATAAATGATAGTCAGTccttctatttaacaattactGTTGAAgccaaaatatatttctgtcAACCAGACGGGGCGTGTTACATGCAAGGCCACCTCTGGAATAAAAGGACACGTGATTCTATTGTTACATACTATACGATACAAGAAAACTGA

Transcript

ENSAPQT00000032922

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BZW8	NHL repeat-containing protein 2 OS=Mus musculus OX=10090 GN=Nhlrc2 PE=1 SV=1
A4IF69	NHL repeat-containing protein 2 OS=Bos taurus OX=9913 GN=NHLRC2 PE=2 SV=1
Q8NBF2	NHL repeat-containing protein 2 OS=Homo sapiens OX=9606 GN=NHLRC2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006333 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13905 all species →	Thioredoxin_8	Thioredoxin-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012336 all species →	Domain	Thioredoxin-like fold	Interproscan
IPR045302 all species →	Domain	NHL2, NHL repeat domain	Interproscan
IPR011042 all species →	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan
IPR013766 all species →	Domain	Thioredoxin domain	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46388 all species →	NHL REPEAT-CONTAINING PROTEIN 2	Interproscan

Gene Ontology

No Gene Ontology signature was detected for ENSAPQP00000029438.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000029438.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.