Detailed information of ENSAPQP00000030085.1 in Leptogorgia sarmentosa

Genomic Location: :...
NR annotation: CAB4007921.1, probable ATP-dependent RNA helicase DDX58 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6Q899Antiviral innate immune response receptor RIG-I OS=Mus musculus OX=10090 GN=Rigi PE=1 SV=2
Q9GLV6Antiviral innate immune response receptor RIG-I OS=Sus scrofa OX=9823 GN=RIGI PE=2 SV=1
O95786Antiviral innate immune response receptor RIG-I OS=Homo sapiens OX=9606 GN=RIGI PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16739CARD_2Caspase recruitment domainDomainInterproscan
PF11648RIG-I_C-RDC-terminal domain of RIG-IDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF18119RIG-I_CRIG-I receptor C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR031964DomainCaspase recruitment domainInterproscan
IPR021673DomainRIG-I-like receptor, C-terminal regulatory domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR000953DomainChromo/chromo shadow domainInterproscan
IPR051363FamilyRIG-I-like Receptor (RLR) HelicaseInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR038557Homologous_superfamilyRIG-I-like receptor, C-terminal domain superfamilyInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR001315DomainCARD domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR041204DomainRIG-I-like receptor, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14074HELICASE WITH DEATH DOMAIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan

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