Gene detail

Detailed information of ENSAPQP00000030195.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB4007154.1, peroxisomal targeting signal 1 receptor-like isoform X1 [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000033699

TCTAAAATTTCAACACAAAGCAAGTTCATGAATGTATAgatgtgaaattaaaataatgatTTGTGGATTTCGTCAGGACAATAATAAGCTTTTGTGATTGTCTGTTTGTTTGAAGATGTCTGGATACGTTCTAGACGAGAAGAAGGacaaataaagtttttatcaTACATAGAACGGTATATACTGTTCACAGACGGTGCAATAATGGCCATGCGTGAACTTGTTGAGGGAGAATGTGGTGGGGCAAACCCTTTGATGAAATTTGTTTCCCATTACACTCAGGACAAGTCTTTGGCTGAGGCCAGTCTTCGGAACCATGTACCTCCTGGTAGCCATCCTCAGGAAATGAAAGCATTTCATGAAGCCACAGATCAAGAGCTTGTTGGTgaatatttcaatgatttGCAACATCACTATGGTGCTCCACAAACATTTCGTATGGATAGTTTGTTACATGAGATCAATCAAGTTGAAACACCCGGACTTGTACATCCAGCAGCTCCAGATATCTGGACAGAAGAATACTTAGCCACGTCACAAGGAGCAGAATCATGGATTGAAGAATACCAAGAGGCCGACGCACATCCAAATATTTACCCTGAGTCCGCACAATCTACCATTCCAACAAAATGGGCATCGGAATACCTTGAAAACTTAAGGCCAGCGGAATTGGATACAGACGCAATCACAAGTCAGGAATCAAGCAGCAAGGAAGTAAAGGATGCGGCAAGTTCACTCTTAGATTGTGCTGAAGATCCGAGATTTAAGAATTCCCAGGTCATTGATGCTCAAAGTGGCAAGGAGATACAATCAGGGGAAGAGGCAGATCGATGGGTTGACGAATACGAGGCAACAATTTCACCTGATGAATATCAATGGCTGGACGAATATACTGCAGGAGAGGTACACGACGATCATGGCCAAACGGCAGCAGATCAGACAGTTAAGGCTGATGGTGATTTCTGGGGTAAACTGGAAGAGGAATGGTATAATCTTGCCAGAGAAAATATAGATGATCATCCTTGGCTAGCAGAATATACGGCTGAGAAGGAGTATGTGTTCGAAGAGAACAACCCGATGATGGAGATTCCTAATCCCTTTGAAGAAGGattgaagaaattaaaagcAGGAGATATTATCAGCGCATTACTTCTGTTTGAAGCTGAGGTTCGACAACGGCCTGAACATGCCGAGGCATGGCAATACCTGGGCACAAGTCAGTCGGAAAATGAGCAGGATAACTTGGCGATTCCAGCTTTGAACAAATGTCTAAGCCTTCAACCTGACAACCTAACTGCTCTAATGGCCGTGGCCGTATGTTACACCAATGAATCTCTCCAATCACAGGCATGTGATGCTCTCAAACTTTGGCTCAGTAGAAACCCAAGATATAGTAGTATACTAGCCCCCACCGCTAGTTCAGAAGATCCATTATCTCGAAGCCCGACGTTAAAGAGTTCCATGATGTCCAACTCAATGTACAATGAAGTTCGTGAATTGTATATAAAGGCTGCCCAACTTTCTCCACATAATAATATCGATGCTGAAGTTCAGATTGGTCTAGGCGTTCTTTTCAATCTCTCGGGAGAATACGATAAGGCAGTAGACTGTTTCCATGCGGCGTTACAAACCAACCCTCAAGATGCACTTGTATGGAATAAACTAGGAGCGACGTTAGCCAATGGCGGAAGGAGTGAGGAAGCCGTCGACGCATACCGTCATGCTTTGGAGTTAAGTCCTGGCTATGTCCGCGCACGTTACAACCTGGGAATTAGTTGTGTTAATTTAAAAGTATATCGCGAAGCTGTGGAGCATTTTCTAACATCCttgaatattcaaaaaaaGGGAGTTCGTCATGGTAGTGAAAGTACATCAACAATGTCTGAAAGTATTTGGACAACTTTGCGAATGTCTTTATCGCTGATGGGAAGACCCGAGTTTCATGAGGCGGTTGATAATAGAAACTTAGACCACCTCAGTGAACAGTTCAATGTACACATAATAGAAGAACCGACCTGATTCGTGGGGCACACGCGTGTGCATAAAGGTAGCGACGTGCCAACAGATCGAAATCGAAATTCTGGTTTCAAACAGATAAGAAAGCTGAAGAGAATTAAGACAGTGAAGCACGAGTTGTGGAGTGTCTGTGATTGAATATtgagaagcaatgaaatccgcTGGAACTGTTTTCTCTCGTGAAATCTTGGTACTTGCAAATCTTCAGTTGAACACTGTACTTATTTTACAACTGTAGGACTGATTtgtaatatattcatataaagttgaaatttaattttacgATTGAACCACGAAGACGCTATCCTTACTCTAGTCTGCAATAAGGCTCGCAGAAATAATATTTGCTCCCAGGAATTGCCCGTTGcgcaaattatgctaattagctCCCGTCGTGGGCCACCTCAATGGTAATTACTCAATGGAAAGCTGATATCATTCACGCATCGACTATCTCATTCGGGTTGTTGTTGTCACATTAACCAACTCACTATATTATCATATCCTGTTGTATTAAATTAATCAGTCCATGATTAATGATGAGAATTTGTTGATAAAACGACTTTGAGTGAGATTTGTATGTGTTTCGTATTCCTTTAAGGCTTTATATATCTGAAGTGGCCTCTTCTTCTTCAATAGACT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q1RMV0	Peroxisomal targeting signal 1 receptor OS=Bos taurus OX=9913 GN=PEX5 PE=2 SV=1
Q2M2R8	Peroxisomal targeting signal 1 receptor OS=Rattus norvegicus OX=10116 GN=Pex5 PE=1 SV=2
P50542	Peroxisomal targeting signal 1 receptor OS=Homo sapiens OX=9606 GN=PEX5 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003346 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13181 all species →	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF13432 all species →	TPR_16	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR024111 all species →	Family	PEX5/PEX5L	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10130 all species →	PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR PEX5	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005052 all species →	Molecular Function	peroxisome matrix targeting signal-1 binding	Interproscan
GO:0005778 all species →	Cellular Component	peroxisomal membrane	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0016560 all species →	Biological Process	protein import into peroxisome matrix, docking	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13342	PEX5, PXR1; peroxin-5	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.