Detailed information of ENSAPQP00000030792.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_046852914.1, non-histone chromosomal protein 6-like [Xenia sp. Carnegie-2017]
Species abbreviation LSARM · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q24537High mobility group protein DSP1 OS=Drosophila melanogaster OX=7227 GN=Dsp1 PE=2 SV=1
O54879High mobility group protein B3 OS=Mus musculus OX=10090 GN=Hmgb3 PE=1 SV=3
Q32L31High mobility group protein B3 OS=Bos taurus OX=9913 GN=HMGB3 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002244 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09011
all species →		HMG_box_2HMG-box domainDomainInterproscan
PF00505
all species →		HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009071
all species →		DomainHigh mobility group box domainInterproscan
IPR036910
all species →		Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR050342
all species →		FamilyHigh Mobility Group Box (HMGB)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48112
all species →		HIGH MOBILITY GROUP PROTEIN DSP1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008301
all species →		Molecular FunctionDNA binding, bendingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10802HMGB1; high mobility group protein B1-Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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