Detailed information of ENSAPQP00000030793.1 in Leptogorgia sarmentosa

Genomic Location: chr5:8515689...8523140
NR annotation: CAB4027662.1, tRNA (uracil-5-)-methyltransferase homolog A, partial [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8IZ69tRNA (uracil-5-)-methyltransferase homolog A OS=Homo sapiens OX=9606 GN=TRMT2A PE=1 SV=2
Q8BNV1tRNA (uracil-5-)-methyltransferase homolog A OS=Mus musculus OX=10090 GN=Trmt2a PE=1 SV=2
Q96GJ1tRNA (uracil-5-)-methyltransferase homolog B OS=Homo sapiens OX=9606 GN=TRMT2B PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003046 (this species only) · gene tree & orthology

 Pfam domain
No Pfam domain signature was recorded for ENSAPQP00000030793.1 in Leptogorgia sarmentosa.
 InterPro
InterPro termTypeDescriptionSource
IPR045850
all species →		FamilytRNA (uracil(54)-C(5))-methyltransferase, metazoa typeInterproscan
IPR010280
all species →		Family(Uracil-5)-methyltransferase familyInterproscan
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45904
all species →		TRNA (URACIL-5-)-METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0006396
all species →		Biological ProcessRNA processingInterproscan
GO:0008173
all species →		Molecular FunctionRNA methyltransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSAPQP00000030793.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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