Gene detail

Detailed information of ENSAPQP00000031025.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB4030728.1, Peptide chain release factor 1 [Paramuricea clavata]
Species abbreviation LSARM · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B3CL87	Peptide chain release factor 1 OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) OX=570417 GN=prfA PE=3 SV=1
A7HTY3	Peptide chain release factor 1 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) OX=402881 GN=prfA PE=3 SV=1
Q2RWE1	Peptide chain release factor 1 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=prfA PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002637 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00472 all species →	RF-1	RF-1 domain	Family	Interproscan
PF03462 all species →	PCRF	PCRF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005139 all species →	Domain	Peptide chain release factor	Interproscan
IPR045853 all species →	Homologous_superfamily	Peptide chain release factor class I superfamily	Interproscan
IPR000352 all species →	Domain	Peptide chain release factor class I	Interproscan
IPR050057 all species →	Family	Prokaryotic/Mitochondrial Release Factor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43804 all species →	LD18447P	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006415 all species →	Biological Process	translational termination	Interproscan
GO:0003747 all species →	Molecular Function	translation release factor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02835	prfA, MTRF1, MRF1; peptide chain release factor 1	-	Translation factors	ko03012	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.