Gene detail

Detailed information of ENSAPQP00000031284.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028393759.1, lisH domain-containing protein ARMC9-like [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

ENSAPQT00000034996

ATGGACGCCGTGATCGGCGTAGAACCGCAGCTAAATGCAATCGTGAAACAGTATGTGGAGTACATGAGCTATGTTTCCACAAAAGAAGCTTTGGAAAAGGAGTTGTCTTCAATGGGGAAATCTATTTCCCATCCTGTGGTCTCCATTTATAGCGACAGACAGAAAGTGGACATTGAGGAGTCACTGATGAGTTGTTTTGGAACTGGAAACTACCAGCATTTCTTCAAGTTATGGGCTGCAAATATCCCGCCAAAAATCCTAAATGAAAACGTCGAATGCCAGAAACTGGAGTTTAATTTGCGCCTATACTTTGCCGTTTACCCGCTCGTCAATAATATGGGTAAAATGGAATTcgagaaaagaaagaaacattttAAGACATATTTAGAAACAACTGGATCCTCGCTCAGTCAGACGACAGAATTTCTTCCTTACTACGCTTTACCTTTCATCGCCAATGTCATTGAACATCCATCATTTAAACCACTTTTTACCGAGTCGTGGAGAAATGATATCAagaaacaactgaaagaatTTTTATCCGAGCAATTGAAATCAGACGAAAAACCAgaattgtataatttattcAAATCGCGGCCTGAAGTTATTGAGAAAGAACGCCAACAATATAACGATCAcataaaagttttgaaaaaccaacTTGCTGAGGCAGAGACCAAGTTGATGGGATATTTCAAGAAATTCAGTCAGATACAGGGAGATTATCACAAGTTGATTGGTATTGCGGCAGAACTTGTAGACTCCTTGGAAGACACGATACGAGGAAAAATTATATCTTCGGAGTATATTCAGGACTTGTGTGCTCGGTTATTCAGCGCCCCAATGCAGCAGTCAATGGATATGACGAAGCCAGGAATGACTTCAAATATGCTGCGAGCTTCGATTGCAAAAGCCAGTTTCAACAGTCTGGAGAACATGACCAATCAACCGTTGGACTTCGAGAAAGTTAAAAATGATCTGACAAACCTGCCTGAACGAAAGAAAGGATTTTTACTGCAGGCTTTGCGATGGCGACTCACACGTTGTGCGGGAGACGAACTGCGAAATTCGACAATGAGAGCTTATATTGGCAATGATTTACTTGGCTGTGCTTTTCCAGGAGAATATCAGGACACGTTGATTGAATTCCTGCAATCTTCCAGCGCTGTTGTGTGTCAGTACTTTGCCAGATTGTTGAATACCATGGCGTCTATGTCCGCTGGCAGGAGTTATTTGTCTCAAAGCGTAAAGTTCGTCGAAGCGTTACAAAAGACCCTTACAACAGAACCAAAAGATTCTATCACGAGTGAGAATATCCTTGGCTGTTTACAAAAGCTCAGTTTAAGGCGTCAACTTCAGACAGTAATGATTGAAAGCGATCTTATCTCATGGCTAATAGATGTATTGGAGGAACATGACTCGCTGTCTGACTACACGTTGGAATATTCTGTAGCTTTGTTGATGAATTTATGTCTCAGAACTTCAGGGAAGCAGAAATGTGCACATGATGCCAGCCACATTTTGCGAGTGTTGAGCGACCTCCTGGGCCACGAAAATCAAGAGATTCGTCCTTACGTGAATGGATCACTTTACAGCATTCTGGCTTTGCCAAACGTGCGAGAGGAAGCGAGGGCAAtgGGAATGCAAGAAATTCTAGAATGTTTTCTCAAAGATGAAGATGTCGATATGCAAAGACAAGTTCAGTTCATTATCAAACAACTAAATCTCAGTTCCGATGAAACTCCGATTAGTTACGATGTCGACTCCGATGACGAAGAAGACGATGTTGACGAGGAAGGTGACGCAATCGATGAAGAACTGGATAAACAGGAAATACTTGAACCAGGGTCCCATGAGTTGGCTGGGGAAGAACTGTTGGAAAAAGAATACGTAATGCGTCCCTCTGACTCTATTAGCGTCGTAAGGAAGTCTAGAAAAAATCACCTTTTATCCAGTCTTGATCAACCACTCAGCAGACCTGTTACTCCCGGAGGCAGAACAGCCGAAAACAACAAGCTCGATCATTTTCCTCGGCCTACCACGACAGTTCTTGGTCAAATACCCGAGAGTATTTCGCCACCAATGACCAGTCAATCTCGCGTCTCGTCCAGACCTAACTCGGCAAGACCTAATTCGGCCAGACCAAACGGATCGAGTCGACCAAACTCGGCTAAATCAAATTCAGCAAAAGATACTTCTCAAAGTCAAGAGGATGTAAAAGTGAATAAGAATTACGGTGCCGAGCAAGAGGCTAAGATGCAAAAACTGATGCAGAACAACGCTCTGACGCAGAGTGAGGTATTTGGGACCAGAAACAAACTACGTCGATCGCATGATTCCCGTAACAACTCGCCGAGACCAGGATCCTCGTCTATCCCACCACTAACCCGCTCAATCTCTCCGCCTCCCCCAAAGTCCGCAAGCAGACCAGGAACTGCTAATAAGAAGAGATGA

Transcript

ENSAPQT00000034996

TGCGAATTTCAAGATGGCGACGAAAACAACGCGATTGTTTATAGCGCTTAGTTACTGTAAAACATCGAATATCTCTTTATCTACACTTCTAGATGTTTTCAAACCGCTATAAAATTGAAGCCCGTGTTTTAAAGTATATATAGTACAATGGACGCCGTGATCGGCGTAGAACCGCAGCTAAATGCAATCGTGAAACAGTATGTGGAGTACATGAGCTATGTTTCCACAAAAGAAGCTTTGGAAAAGGAGTTGTCTTCAATGGGGAAATCTATTTCCCATCCTGTGGTCTCCATTTATAGCGACAGACAGAAAGTGGACATTGAGGAGTCACTGATGAGTTGTTTTGGAACTGGAAACTACCAGCATTTCTTCAAGTTATGGGCTGCAAATATCCCGCCAAAAATCCTAAATGAAAACGTCGAATGCCAGAAACTGGAGTTTAATTTGCGCCTATACTTTGCCGTTTACCCGCTCGTCAATAATATGGGTAAAATGGAATTcgagaaaagaaagaaacattttAAGACATATTTAGAAACAACTGGATCCTCGCTCAGTCAGACGACAGAATTTCTTCCTTACTACGCTTTACCTTTCATCGCCAATGTCATTGAACATCCATCATTTAAACCACTTTTTACCGAGTCGTGGAGAAATGATATCAagaaacaactgaaagaatTTTTATCCGAGCAATTGAAATCAGACGAAAAACCAgaattgtataatttattcAAATCGCGGCCTGAAGTTATTGAGAAAGAACGCCAACAATATAACGATCAcataaaagttttgaaaaaccaacTTGCTGAGGCAGAGACCAAGTTGATGGGATATTTCAAGAAATTCAGTCAGATACAGGGAGATTATCACAAGTTGATTGGTATTGCGGCAGAACTTGTAGACTCCTTGGAAGACACGATACGAGGAAAAATTATATCTTCGGAGTATATTCAGGACTTGTGTGCTCGGTTATTCAGCGCCCCAATGCAGCAGTCAATGGATATGACGAAGCCAGGAATGACTTCAAATATGCTGCGAGCTTCGATTGCAAAAGCCAGTTTCAACAGTCTGGAGAACATGACCAATCAACCGTTGGACTTCGAGAAAGTTAAAAATGATCTGACAAACCTGCCTGAACGAAAGAAAGGATTTTTACTGCAGGCTTTGCGATGGCGACTCACACGTTGTGCGGGAGACGAACTGCGAAATTCGACAATGAGAGCTTATATTGGCAATGATTTACTTGGCTGTGCTTTTCCAGGAGAATATCAGGACACGTTGATTGAATTCCTGCAATCTTCCAGCGCTGTTGTGTGTCAGTACTTTGCCAGATTGTTGAATACCATGGCGTCTATGTCCGCTGGCAGGAGTTATTTGTCTCAAAGCGTAAAGTTCGTCGAAGCGTTACAAAAGACCCTTACAACAGAACCAAAAGATTCTATCACGAGTGAGAATATCCTTGGCTGTTTACAAAAGCTCAGTTTAAGGCGTCAACTTCAGACAGTAATGATTGAAAGCGATCTTATCTCATGGCTAATAGATGTATTGGAGGAACATGACTCGCTGTCTGACTACACGTTGGAATATTCTGTAGCTTTGTTGATGAATTTATGTCTCAGAACTTCAGGGAAGCAGAAATGTGCACATGATGCCAGCCACATTTTGCGAGTGTTGAGCGACCTCCTGGGCCACGAAAATCAAGAGATTCGTCCTTACGTGAATGGATCACTTTACAGCATTCTGGCTTTGCCAAACGTGCGAGAGGAAGCGAGGGCAAtgGGAATGCAAGAAATTCTAGAATGTTTTCTCAAAGATGAAGATGTCGATATGCAAAGACAAGTTCAGTTCATTATCAAACAACTAAATCTCAGTTCCGATGAAACTCCGATTAGTTACGATGTCGACTCCGATGACGAAGAAGACGATGTTGACGAGGAAGGTGACGCAATCGATGAAGAACTGGATAAACAGGAAATACTTGAACCAGGGTCCCATGAGTTGGCTGGGGAAGAACTGTTGGAAAAAGAATACGTAATGCGTCCCTCTGACTCTATTAGCGTCGTAAGGAAGTCTAGAAAAAATCACCTTTTATCCAGTCTTGATCAACCACTCAGCAGACCTGTTACTCCCGGAGGCAGAACAGCCGAAAACAACAAGCTCGATCATTTTCCTCGGCCTACCACGACAGTTCTTGGTCAAATACCCGAGAGTATTTCGCCACCAATGACCAGTCAATCTCGCGTCTCGTCCAGACCTAACTCGGCAAGACCTAATTCGGCCAGACCAAACGGATCGAGTCGACCAAACTCGGCTAAATCAAATTCAGCAAAAGATACTTCTCAAAGTCAAGAGGATGTAAAAGTGAATAAGAATTACGGTGCCGAGCAAGAGGCTAAGATGCAAAAACTGATGCAGAACAACGCTCTGACGCAGAGTGAGGTATTTGGGACCAGAAACAAACTACGTCGATCGCATGATTCCCGTAACAACTCGCCGAGACCAGGATCCTCGTCTATCCCACCACTAACCCGCTCAATCTCTCCGCCTCCCCCAAAGTCCGCAAGCAGACCAGGAACTGCTAATAAGAAGAGATGACGCGAGACGGCCGATAAAGAACTGGTTAATG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5R629	LisH domain-containing protein ARMC9 OS=Pongo abelii OX=9601 GN=ARMC9 PE=2 SV=1
Q2KI89	LisH domain-containing protein ARMC9 OS=Bos taurus OX=9913 GN=ARMC9 PE=2 SV=1
Q7Z3E5	LisH domain-containing protein ARMC9 OS=Homo sapiens OX=9606 GN=ARMC9 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003427 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21050 all species →	ARMC9_ARM	LisH domain-containing protein ARMC9, ARM repeats	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR040369 all species →	Family	LisH domain-containing protein ARMC9	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR048959 all species →	Domain	LisH domain-containing protein ARMC9, ARM repeat domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14881 all species →	LISH DOMAIN-CONTAINING PROTEIN ARMC9	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005814 all species →	Cellular Component	centriole	Interproscan
GO:0036064 all species →	Cellular Component	ciliary basal body	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan
GO:0097542 all species →	Cellular Component	ciliary tip	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22864	ARMC9; LisH domain-containing protein ARMC9	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.