Gene detail

Detailed information of ENSAPQP00000031483.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB4043082.1, alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1 [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5PQ59	Probable RNA/DNA demethylase ALKBH6 OS=Xenopus laevis OX=8355 GN=alkbh6 PE=2 SV=1
Q6IQE9	Probable RNA/DNA demethylase ALKBH6 OS=Danio rerio OX=7955 GN=alkbh6 PE=2 SV=1
Q3KRA9	Probable RNA/DNA demethylase ALKBH6 OS=Homo sapiens OX=9606 GN=ALKBH6 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006288 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13532 all species →	2OG-FeII_Oxy_2	2OG-Fe(II) oxygenase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037151 all species →	Homologous_superfamily	Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily	Interproscan
IPR005123 all species →	Domain	Oxoglutarate/iron-dependent dioxygenase	Interproscan
IPR027450 all species →	Domain	Alpha-ketoglutarate-dependent dioxygenase AlkB-like	Interproscan
IPR032862 all species →	Family	Alpha-ketoglutarate-dependent dioxygenase alkB homologue 6	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46030 all species →	ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 6	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10768	ALKBH6; alkylated DNA repair protein alkB homolog 6	EC:1.14.11.-	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.