Gene detail

Detailed information of ENSAPQP00000031572.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3990999.1, Nuclear transcription factor Y subunit alpha, partial [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5E9S2	Nuclear transcription factor Y subunit alpha OS=Bos taurus OX=9913 GN=NFYA PE=2 SV=1
P18576	Nuclear transcription factor Y subunit alpha OS=Rattus norvegicus OX=10116 GN=Nfya PE=1 SV=1
P23708	Nuclear transcription factor Y subunit alpha OS=Mus musculus OX=10090 GN=Nfya PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008743 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02045 all species →	CBFB_NFYA	CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018362 all species →	Conserved_site	CCAAT-binding factor, conserved site	Interproscan
IPR001289 all species →	Family	Nuclear transcription factor Y subunit A	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12632 all species →	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0016602 all species →	Cellular Component	CCAAT-binding factor complex	Interproscan
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08064	NFYA, HAP2; nuclear transcription factor Y, alpha	-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.