Gene detail

Detailed information of ENSAPQP00000031629.1 in Leptogorgia sarmentosa

Genomic Location: chr6:1684333...1687420
NR annotation: CAB4015796.1, Hypothetical predicted protein [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ENSAPQT00000035395

aacaattttaatttttcccgCCACAAAAAAAGAACTAAATGGATAACAAGGGATCACAAACCGGCCAACTACTTCGGGGGAACGTCGGCTAATGCCGGTATCCGATATGTTCCGAAGCAGTTCCGAACAGGTGACGCGTCTCAACAACACGTCGCATGGCAACAAGATACAATTGCATTCTATATATAAACAAAGAACACCGAACAAACCCAAAAAGCAGCTTATCGGTTCGAGGCAAGATCGCAACACATCATTACTAGTATCTTCCTGATTTTGATCTTTTCTTGACTTTTAAACAGATGGCTACTCGTTGTATTTGCCAGATTTGTACTTGCGGGAGACACAGATGTGTTCACCATCCTGAAATACGAGTCAGACCTGGGTCCAAGTGTCTTCTCTCTGAATACAGGGACACATATCGTAATGTAGCTGTACCTCGTACcatgccaataaaaccaaatGGTGCACCAAAATTCTCAAATGAACCACTAGAGGGTAAGACGACCACCAACACAACCTACATTCCTCACCAAGTCCAACCTCCAAGCAAACGCGAGAAAGAAGAATATCGTAAGCCCCAAGGGGATGTTGAGAAGACATCAAGTTATACCTATGACTACATACCACACAGGACTAACCCTGCATCCACAGCCAAACCATTGCAGCAGTATGTAGCAAGTCAAGGTCCATTTGAGGATGGCACCACACACAACCACACCTATATTCCATGGGACCTCCATGGTGCCAAAGTGAAAAGCATGAAACCTGATAACTCCCTCAAGACAACCGATGCAAAAATGGATTCAAAATCCACACAACAGATGGACTTTCCTGGCCATTATGGCTCCCGGACACAGCCTATCAACCCACCAGCCCCTGCATTTAGATTGTCATCAGCACCCATGGAaggaaaaacaacaacaaaggttGATTACACAAAGAAGGATATCCGACCGAGAACTGCAATGAAACCAGTATATGAGTATCCCACAGATAGACCACGATTAGATGACATGACAACTTGCAATCGTGATTTCACGTGGCAAGAAGGCAAGCCTGCAACTAGTTTCAAACCTCCAGCTGCTCTTATGACATCTGGTGTTCCCTTTGAAGGTGATACAAGTTATCTAAACACTTTCAAACAATGGCCTTTGACGAAACGAGAGCCCAGAGAAAAAGAAACTTACCAACCACCTGCAACAAAATTTGATGGGACAACATCGTTTCAACGCGATTATGTCAAGCATCCACTGTGCCGTGCCAAACTTGCTAAACCAGATGTCTACGCTTTCACATCAAAACAACCTATTGATGATAGCACTGAACATAATGATGCATTTAAGCAATGGAACGTTGGCTTACCAGACAGGGTTCGTAAACCAGATAAGTACAGAGCACCGACCACAAAGTTTGATGGACGAACCAACTATCAAAGTCACTACACTGGTGATTTTGCTCCACCTGCAGAGACTGTCAGGCCTTTACTAAATGACAGAGTCAAAGGAGATATGGAATTTAAAACAAGTTACAAAGACACATACAAGGGTCATCGTCCACCACCATGTCCTGCAACATACCTTTCATCTGGTCCTGGTGGAGTGCAGGATGGTTTTACGTACACACATGCTGCACATGGACATACATTTTATAGACCTGCTATGGGTCAAAGCAATGAGCCCATGCACACACAGGCCTGAGTTATCAACTCATGCAATTTGAGTTGCATATAATAAAGCAATATGTTTGAGGTAGAACTGTGTGTTTTCATGGGAGTTGTGATTTCACTAAGAGTGACAAAGCAAACGAACAACTTAAATCTAAATCACAGTAAGACCCTTTATCATTACTAGGTATGACATTGGGCTTGTGCAAATACCAATTCATTACAAATACTGACATTAAAAGTGCACCTATAAATGGATAACAATATTGTACGTTGTTCTGTCAACTAACAGCAtgtgttgtaaaatgtaatCACATTTAATTGCACTGATATAattaaaatgggataaaaaacgAGGTGCATTTCTCCTTTTGTTGTGTTCTGCTTTGTTAGGAGAGACACTTTTAGTTGATAACAGTTTAAGGTACTGAATATTGCATCGTCCTTTTATGCAACCTTGTACCCAGGCTCATACCTTTACCCGACCCAACCCCTCATGCTAAGTGACATGTCCCCTCCAATGGCTTAACATTTTGTGTAACACaaaagtttttaataaaatacaataaaccACATGGAGGGGCCATATCAACCCTTAGGCACTTGATATTTTACCATGCTTTTCGTTATCTTCGTTAACTGCTAAAACGTCTGCTAAGGAAGAAGGGGTGTTGTACTTCACGATATTTTAGAAGCAAGGTTGTCTTGTGCAAACCATGGTCTTTTACTTCTGTTTGCCGGAGTGGACGCGGTGGGAGGTGGGGGTGGCCCTCGACGCGAGAGTTCGCCAATGTATTGGTAGAGGATTCTATCACGTTCATCATCGGCATCATCAAGCACCAAATAACGACGGTCTTGCTGAAATAAGTAAAGGAGAACGCCACTGTTGTAGAGTAGATTGAATTGTGTAGATTGAGTGAACATTTCTAGAAACGAACCTTTAACGTTTCGATTATATCCTTCAAGTGCCGGTCTGATTCAGCTAAAAGTTTGCTTGACC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8IYX7	Stabilizer of axonemal microtubules 1 OS=Homo sapiens OX=9606 GN=SAXO1 PE=1 SV=2
Q6AYP6	Stabilizer of axonemal microtubules 1 OS=Rattus norvegicus OX=10116 GN=Saxo1 PE=2 SV=1
Q4R7D3	Stabilizer of axonemal microtubules 1 OS=Macaca fascicularis OX=9541 GN=SAXO1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008310 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05217 all species →	SAXO1-2	Stabilizer of axonemal microtubules 1/2	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR033336 all species →	Family	Stabilizer of axonemal microtubules 1/2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31516 all species →	STABILIZER OF AXONEMAL MICROTUBULES 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005814 all species →	Cellular Component	centriole	Interproscan
GO:0005856 all species →	Cellular Component	cytoskeleton	Interproscan
GO:0005879 all species →	Cellular Component	axonemal microtubule	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0036064 all species →	Cellular Component	ciliary basal body	Interproscan
GO:0036126 all species →	Cellular Component	sperm flagellum	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K25472	SAXO; stabilizer of axonemal microtubules	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.