Gene detail

Detailed information of ENSAPQP00000031886.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028402507.1, ubiquitin carboxyl-terminal hydrolase 14-like isoform X2 [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000035695

AGGAATTTGTTTGAAGACTGTAGTTGAAGTCGTGGTTGTGGGTGATTTTTGTacattattgttctatttgtTCATTGGTTGAGGATGCTGGTAGTGGTTCTAAGAATTATTCTTAGAATTCATTTCACTTGATTGTAGACTACATGAAGTATTACATATGCGGCGGTCATATTGAAGTAGCACTTTCATGTTTCATGGTGATCAAGATAAACTGAGTCGCAAATAAGTACTGTGGTTGTTTTTGTGTTAGCATTTGTGTTCAGAAAGTTTGATTTCTTGAAAGAATGCCGTCTTATCAAGTGTCAGTAAAATGGGgcaaagaaaaatttgaaaatcttGAAGTGAACACAGATGAGTTACCAGAATTGTTTAAAGCACAATTATTTGCTTTGACAAATGTTGCTCCTGAAAGACAAAAAATCATGCTTAAAGGAAGTGTATTGAAGGATGATAGCTGGAATAATATGAAACTTAAAAATggatgtatgttgatgatgatgggcaCTGTTGGTGAACTACCTCAAGCCCCAACAGAGAAAGTAATGTTCATGGAAGACATGTCTGACTCACAGCTTGCTGCAACTTTAAAACTACCAACAGGACTTGCAAATCTTGGAAATACATGTTACATGAATGCAACAGTGCAGTGTTTGTGTACTGTTCCTGAGTTGAATGAAGGTCTTGAGAAGCACCATAGCAGTGTTGGTGGTCTCTCTCAGTTTGGTTCCAGTGAGCAAACTGTTCTATCAGGACTCAAAGAAACCTTTcataaaattaaagaaaattcaGACAGCTTTCCACCATTCTTCTTAGTCCAAGCTTTACATCAAGCATTTCCTCACTTTGCAGAGAAGAATGAACATGGTGTCCCAATGCAGCAGGATGCTAATGAATGCTGGACGCAGTTTGTACGTATTCTCCAACAAAAGTTACCAGGCGTGTCCACAGATCAAGGAGAGGTTAATACAGCTGGTGCTGTTGCTAAATCAAGTTCATTAATTGACCAATATTTTGGTATACAATTTCAAAGCACTTTAAAATGTACAGAAGCTCCAGACGAACCCGAATCCGTCTCAAACGAAACTCTATTTCAACTCAGTTGCTTTATTGACAAAGatGTCAAATATCTTCATACgggtttaaaaaatCGGCTAACAGAAACGATTCATAAAAACTCCGCAACACTTGCACGAGATGCTGAATACACGAAATCGtCTCTCGTCAAGCGTTTACCAGCTTATCTGTCCATACAGTTTGTGCGCTTTTATTataaagaaaaagagaaaataaatGCAAAGATATTGAAGGACGTGAAATTTCCGTTAACGCTAGATATGTTCGACCTGTGCAGTCCAAAacttcaacaaaaattaattccGATCAgagacaaatttaaaataatggATGATAAAAAACTGGAGGACGAGAAGAAAGCGAAACTCGAGGGAAAGAAATCTTCCCAAGAGAAGATGGATGTTGACGAAAAGAAAGAGTATGAACCTTATTCGTTTCCAGAAGACACTGGTTCAAACAACAGCGGACTTTATGAACTTCAAGCTGTGCTAACCCATCAAGGACGTTCATCGTCGTCTGGTCATTACGTCGCATGGATCAAGAAAAGTGAgcAAATCGTGACGACGCCAGTGTAAGGATTTGGACCAGGTCTGTTGTTGTGGAAATGACATGACAGTACTCGACTTTTAACAGTGTGGAAGTAAACTGCTGGTGCGCCATTCACATTAGATATATCGTAAAAATTTCCTTCGAATGTATTATTCTCGAGAATTATTGTGGGTGATAGCTCTACTGAGTACCCTTTTTTAGGACAGTAAGTAGAAACTCGAAGTGCCACGGAATTATTTCGAAAGATGGACTTTTTTATCTTAATGTCTACCTTAGCGTAGTCCTGGCAACCAGCGTATAGTGAGAGGGAACCCCAGTTGTTGTAGTTATTTTCAAATGTCATATTGTCGAATAAAATGaatgtaatgttccgaacatCCAAACGGTAGTCGTATATTAGTGCAGTCGATACCTGATTTGTATTGCAATATGCTAAATGATTTTTGAACTCTGAGTTCATTATTGTGACATTTAATACAGCTGCAAACGACTTTATCGTGAACATTGGAGAACATTTTTGAATCTTTTTGTCATTAAAAGTCGTATGTTCAACTAAAATCTCTGTTTTTGTCCAACGCGTTGGTTCATTACCAACGTTTGTGAAGAGCACAGGAGTAAATATGAAGGAAGCAGAGTTCATATGTACAGTGAGATTGGTACATTGCAAATATATTCCCCAGTATGAATTGAAGTTATGGTCAAAACttgagtttaaaattttgattgaACAATCAGTCGAGCGTTTGCTGTACAGAGCGAGATTGTTATCCTTGACCaacatattttgaaatgataATTCCGTTCTAGCTTTTGCACCAAGTTCAGCAAcaatatttgattttgataTAACCAAGTTGAAGAACTTGATCCGCGTGATATCAAAACTTGGGTTCGTTATCGTGAAAAAATTGGAACATTTGCGGCATTGAATTTCAGATGTCCCATTCAAACCATGAAACGAAAGAGATTTTGTCAATTCGATAGCACAAGATGCTATCACATT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9JMA1	Ubiquitin carboxyl-terminal hydrolase 14 OS=Mus musculus OX=10090 GN=Usp14 PE=1 SV=3
P60051	Ubiquitin carboxyl-terminal hydrolase 14 OS=Pan troglodytes OX=9598 GN=USP14 PE=3 SV=2
P54578	Ubiquitin carboxyl-terminal hydrolase 14 OS=Homo sapiens OX=9606 GN=USP14 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004938 (this species only)
Ubiquitin family	ULD\|UFD/UBQ\|UBQ_Other · all ubiquitin genes in this species
Ubiquitin family	DUB\|USP\|USP · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00240 all species →	ubiquitin	Ubiquitin family	Domain	Interproscan
PF00443 all species →	UCH	Ubiquitin carboxyl-terminal hydrolase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019954 all species →	Conserved_site	Ubiquitin conserved site	Interproscan
IPR044635 all species →	Family	Ubiquitin carboxyl-terminal hydrolase 14-like	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR000626 all species →	Domain	Ubiquitin-like domain	Interproscan
IPR018200 all species →	Conserved_site	Ubiquitin specific protease, conserved site	Interproscan
IPR028889 all species →	Domain	Ubiquitin specific protease domain	Interproscan
IPR038765 all species →	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR001394 all species →	Domain	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43982 all species →	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004843 all species →	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0016579 all species →	Biological Process	protein deubiquitination	Interproscan
GO:0043161 all species →	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0061136 all species →	Biological Process	regulation of proteasomal protein catabolic process	Interproscan
GO:0070628 all species →	Molecular Function	proteasome binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11843	USP14, UBP6; ubiquitin carboxyl-terminal hydrolase 14	EC:3.4.19.12	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.