Gene detail

Detailed information of ENSAPQP00000031940.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB4009890.1, SERAC1 isoform X1 [Paramuricea clavata]
Species abbreviation LSARM · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000035754

CAGAGAAACAATGATAAGAAAAACTCATAAGAgaaaagagcctgggaacgaggttggaaaAACTTTTCTCGATAACATGGAGCTAGGTTGGATTCCGATACGTTACGAGTGGTTGTCGAAAGAAGCCGAGGAGATAATTGCGACAAGCGGGgacatttaaatttgttttgatcatGCTGAAAAAAGTCGCAAAAATCCAAATATTAAATGGCGTTAATCGTGTGTTTTCTTGCAGAATTTGTTCAGgatAGTTGCAATGTCGTATCTAATATGTGATAGTACAAGGCATGAAAGCAATTGGTAAACTGGGCATACGTTTGACAGCTGTGTTAGGTGGCACATGTATCTCATATCTGGTTTTCAATCAAAGAGAATATTTGAATGTTAAGATTCCAAACAGCCAGCAGTTACAGGCTGTCATACCCACAGGATCTCAAGTTCTAGGCTTTTTGGTTGCTCAATTTCCAAAACAGATCTTGCATTTTATGCATTCAGATCATTTCTTTATCAGAGATGTTTCTCAGAATTTGGTAGCGTCCGCCAGCCTGCCCAAAGGTTTCAACCTTGCTGCCTCCCTTGGTGAAGTCCCTGGTAGTACTTTGACAACACTTGTGAGAAACTTATCTGTTGATGAACACTACTTTTCGATCAACTCTGAGGTTGTTCCAACGAGTGAACAAGAACTGAGCGATGCATTTCGTCAACTGCTATCGTGTCTACCAACCTCTGGACAGTGCGCCACGTGGTTCACTGAATCCGCTTTTCATGGTGGGAAATCTGGTCACAACTTGTACAAGACAATATTTTGGCACCCCGAACACGAGGATCATCTCGAAACAGTTTCGTCAACTGATGAAATTCTCCTGTTTCTGAAAGCGCTGCTAAAACATTCTGAACTCAAGAGACATCGAGTGCTCATCCTGGAGAACAACGGATTGGACTTGCTACGCTTAGTGAGTATCGGATACAGTGACGTCAAAATTACAAGATTGCTGTCCCACGTTCTTGGAAATCTAACATTGGATGAAACGTCACACAAAGAAATTATTCATAAAGGTTGGTTGAGAGAGCTGTCGACTTGGATAAAATCAAATGACATCGTTGTCAAAAGTCACTCGGCACGAGCTCTGGCCAATCTGGACAGGGAGGGAGAAATGGGTCATTCATATGAAGATGGAATTTTTGTTGCTTATCCAGCCAAACAGCTTAAATGTTGTAGACCTGAAGTTGATCTCGTGTTTGTTCATGGCTTACGTGGAAGTCCATTCAGAACGTGGAGAAGTAGAAGTAGAACAGATGAAATTGtggaagaaaaacaaacagaCTGCTGGCCTAGGGATTGGTTTCCAGTCGACGTGCCGAGGTGTCGGGTTTTATTGGTTGAATACGATACAGAATTGAGCGGCTGGACCTCGAAATGTCCAATGCAACCAGAAATTTCCACCATCGAGTATCGAAGCTCCGaacttttgaacaaattgaaGAATGCTGGTGTAGGGAAGCGTCCCGTTGTCTGGATCGCACATTCCTTGGGAGGATTGATGGTGAAACAAATGATTTTGGACGCTGCGAAATCACCAGAATTTAATTCATTGAACGTAAACACCAAAGGTGTCGTGTTCTACGCTGTGCCGCACAAGGGTTCTGATATTGCGTCAATGGTGACTGGAAAAGCAAGATATGTTTTTTTACCGTCTTTTGAGGTCAAAGCGTTACAAAAAGGGTCGGAATATCTTGAGCACCTTCAGAACAACTTTGTCAACTTCATACGGGAAAACAAGATTGGCGTTCTAAGTTTTGCTGAAACTTTACCAGCAACAACGATCGTACGCGACACACTTGTAGTTTCTTCAGACTCTGCAGATCTTGGAGTTGGTGAATTTATTCCACTCTCCGCCAATCACTATGAAGTATGCAAACCTTGTAGTCGTTGGGTTCCAGCTTATACGAGAACCGTAGACTTCGTCAAACAATACTTGGACACGATTGATGTTGAAGATTTCATGCCTattcttttgttttaaaaagagTTGTGGACACATCAAGAAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5SNQ7	Protein SERAC1 OS=Danio rerio OX=7955 GN=serac1 PE=3 SV=1
Q2TBM9	Protein SERAC1 OS=Bos taurus OX=9913 GN=SERAC1 PE=2 SV=1
Q3U213	Protein SERAC1 OS=Mus musculus OX=10090 GN=Serac1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005481 (this species only)

Pfam domain

No Pfam domain signature was detected for ENSAPQP00000031940.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR052374 all species →	Family	SERAC1	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48182 all species →	PROTEIN SERAC1	Interproscan

Gene Ontology

No Gene Ontology signature was detected for ENSAPQP00000031940.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23504	SERAC1; protein SERAC1	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.