Gene detail

Detailed information of ENSAPQP00000032332.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3985486.1, jagged-2-like isoform X2 [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

ENSAPQT00000036171

ATGGCTTCAATCAAGATACGGTGGTACGGGATATCTTCAAATTATCTACCAAAATATGCCAAACCTTCTTTGCAACGTACCATTTCTTCCGCTAATGTTTATACTCGTATTTTTAGATGGAGAACTGCCGGCTTCCGGCGCAATGATCCATTTGGTTGTTCGCAATTAAACTTCAGTTTGGTGGATCTTGTCGTAATGGCGTCGTGGTTGAAGAAGCCTTTCACTAGTTTCCTTTGGTTGCTTTTACTCGGTTGTTTCCTAATTGGCGAGGTTGTCGGTAACAATCTATTTGGTGAAGTAAGGTTAAAAGTTTTATTGACAAGATTTTCCAATCCTCTCAACCACAATGCTGATAATCAATGCTGTGATGGCAAGAAAAACGCTTCCATCTGCACAGACAAttgtgatatattttttgtcgTCTGCCCTTCTACCGCATCATCATCGTGTGTAAAATCCCGAGTAATTTTGCAGAATAGTTCGGAGTTTACAGCATCACAAAGAAATCTGACTGCTTCAAGTGAAAACACGGATGGAAATTTCGTCTCCATGTTTTTCAAAGTTAACCCAGAGCAATTTAGTCATTTTTCAGTGCGTTTGTACGATGATGATTCACAGGATCTATTGCCCAATGAGAGCCAGTCTTTGAATGAAACGGTCATTGAGTTTATCGAAAAATTACCAACGCCAGTCAAGAGCCAGTCGTTTCATCGAAACATTTCTAGGAATAATATTTCGTTTGAGTTTGTATATAGTCTGAGTTTCTCATGTGAAAAGTTCTTCTATGGCGATACGTGTCAAGTTTATTGTCGGCCCAGAGATGATGAATTTGCCCACACACAATGTCTTCCAAATGGAACAACTGTATGTTTGCCTGGTTGGGAAGATCTTAAAATATCTTGTACGAAGCCAATTTGTCCAGGTGGTTGCGTAAATGGAAGGTGTAAGGGGCCCAACTTTTGCAGGTGTGATAGCCTGTGGACTGGACCAACATGCGAGGAATGCGTCCCGGACAGTCGCTGTTTACACGCCACTTGTATTCAACCTGGTAACGGCTGTATTTGCAAAGCGAACTGGACTGGAACCTACTGTAATGTCTATATTGACTACTGTTCACGCTATCATCCTTGTAAGAATGGGGAATGTCACAACCACAATTCCAAAAACTTCACCTGTACATGTCATTCTGGCTGGTCTGGTCCGAAATGTGATAAATTTCTTTGCGCTCCTTCCTGCAATCTCACCAACGCCGTCTGTACAAGCATAGGTGAATGCAGTTGTAATGCCGGATGGACTGGTGCGGACTGTAACCAATGCCTACCCAAGAGCAATTGTACACATGGTTATTGTAATGGACCGTTTGAATGTGTGTGTGAAGAGGGGTGGGGTGGGGAGAATTGTACTGATCCCGTGATCAAGTCAAGGTGTACACAGCAGAATCCTTGCCAAAACAATGGCGTGTGCAACGACTCTACCATGGGCAACTATCATTGTAATTGCAAGCAAGGCTTTGTTGGACGCCATTGTGAGGATAAGTTGGTGACTACTGAACGCCCAGTTTTAGATCGATGTTCAACTTGGTGTAACAAAAGTTATGGTcattgtgaaaataacgagTGCAGGTGCGTCCCAGGCTGGCGAGGTCTGAATTGTACAGAGTGTGTGAGGAACTCATCCTGTGTCAACGGCTTTTGTCGTCGAGCGTTTGAGTGCATCTGTTACGCAAATTGGACTGGGCCTTCGTGTAATGTCAGCCTGAATAATGAATGCAGCTCTGATAGCAACAGTTTATCATGTGGTCAAGTTGAGGAGAGGATATCAAGTGGGTCAACGACAGacaATGATAAACTGATATACATTCTTTCAAGCGTGCTAGTTCTGCTAATCATAGTTATTTTACTACTTCTTGCTTGGAAGTTACGTCGGAGACGAGCGACATTCGACGTGACATCACCGGAGGTTGTCGTGAACACCTTCGGTAAACCATCGTACATAATGGGCAATATGAACGGGGAAAAGCACGAGTTGGGTTTAAACAACAATGCGGTTTCTCAGAAACGTACGTCGCCAGAGGTTCATTTGAATCCCATAGCTTTGCAGCCGTCCCAGAACTCCAGAAGCATGCTACTTGCGAATGAATCGGAGATTTACGAGTGCAATGATGTCATTAGCAATGAAGATAGTTCACCGGATTCTTCAGAATATCGCATAATATAG

Transcript

ENSAPQT00000036171

TGAAAGGAACGTGCTCTACCTAATGTTTCAGCACTAGGCGACAGCCTGCCGTagaatgtttttaaactgCCAATAGGTACAGACTGTCAAATGGTAGGCAGACGGAAAGTGTTATAATCATTGCGAATTTATGGCCTCGAGGAGTTAAGAGGTTAGCTTAGATGATAAACTTCTTAAGTTCTGCGGAAGCGATGAAACTGATCAAAGCCAAAGCATTTAAGAGCGGATACTTTGCGAAGTCAAAATAACTCGTTAGTTTGTGCGATAACTCGCCGTCACACGGGTCGCGCAATACACAGATGGCTTCAATCAAGATACGGTGGTACGGGATATCTTCAAATTATCTACCAAAATATGCCAAACCTTCTTTGCAACGTACCATTTCTTCCGCTAATGTTTATACTCGTATTTTTAGATGGAGAACTGCCGGCTTCCGGCGCAATGATCCATTTGGTTGTTCGCAATTAAACTTCAGTTTGGTGGATCTTGTCGTAATGGCGTCGTGGTTGAAGAAGCCTTTCACTAGTTTCCTTTGGTTGCTTTTACTCGGTTGTTTCCTAATTGGCGAGGTTGTCGGTAACAATCTATTTGGTGAAGTAAGGTTAAAAGTTTTATTGACAAGATTTTCCAATCCTCTCAACCACAATGCTGATAATCAATGCTGTGATGGCAAGAAAAACGCTTCCATCTGCACAGACAAttgtgatatattttttgtcgTCTGCCCTTCTACCGCATCATCATCGTGTGTAAAATCCCGAGTAATTTTGCAGAATAGTTCGGAGTTTACAGCATCACAAAGAAATCTGACTGCTTCAAGTGAAAACACGGATGGAAATTTCGTCTCCATGTTTTTCAAAGTTAACCCAGAGCAATTTAGTCATTTTTCAGTGCGTTTGTACGATGATGATTCACAGGATCTATTGCCCAATGAGAGCCAGTCTTTGAATGAAACGGTCATTGAGTTTATCGAAAAATTACCAACGCCAGTCAAGAGCCAGTCGTTTCATCGAAACATTTCTAGGAATAATATTTCGTTTGAGTTTGTATATAGTCTGAGTTTCTCATGTGAAAAGTTCTTCTATGGCGATACGTGTCAAGTTTATTGTCGGCCCAGAGATGATGAATTTGCCCACACACAATGTCTTCCAAATGGAACAACTGTATGTTTGCCTGGTTGGGAAGATCTTAAAATATCTTGTACGAAGCCAATTTGTCCAGGTGGTTGCGTAAATGGAAGGTGTAAGGGGCCCAACTTTTGCAGGTGTGATAGCCTGTGGACTGGACCAACATGCGAGGAATGCGTCCCGGACAGTCGCTGTTTACACGCCACTTGTATTCAACCTGGTAACGGCTGTATTTGCAAAGCGAACTGGACTGGAACCTACTGTAATGTCTATATTGACTACTGTTCACGCTATCATCCTTGTAAGAATGGGGAATGTCACAACCACAATTCCAAAAACTTCACCTGTACATGTCATTCTGGCTGGTCTGGTCCGAAATGTGATAAATTTCTTTGCGCTCCTTCCTGCAATCTCACCAACGCCGTCTGTACAAGCATAGGTGAATGCAGTTGTAATGCCGGATGGACTGGTGCGGACTGTAACCAATGCCTACCCAAGAGCAATTGTACACATGGTTATTGTAATGGACCGTTTGAATGTGTGTGTGAAGAGGGGTGGGGTGGGGAGAATTGTACTGATCCCGTGATCAAGTCAAGGTGTACACAGCAGAATCCTTGCCAAAACAATGGCGTGTGCAACGACTCTACCATGGGCAACTATCATTGTAATTGCAAGCAAGGCTTTGTTGGACGCCATTGTGAGGATAAGTTGGTGACTACTGAACGCCCAGTTTTAGATCGATGTTCAACTTGGTGTAACAAAAGTTATGGTcattgtgaaaataacgagTGCAGGTGCGTCCCAGGCTGGCGAGGTCTGAATTGTACAGAGTGTGTGAGGAACTCATCCTGTGTCAACGGCTTTTGTCGTCGAGCGTTTGAGTGCATCTGTTACGCAAATTGGACTGGGCCTTCGTGTAATGTCAGCCTGAATAATGAATGCAGCTCTGATAGCAACAGTTTATCATGTGGTCAAGTTGAGGAGAGGATATCAAGTGGGTCAACGACAGacaATGATAAACTGATATACATTCTTTCAAGCGTGCTAGTTCTGCTAATCATAGTTATTTTACTACTTCTTGCTTGGAAGTTACGTCGGAGACGAGCGACATTCGACGTGACATCACCGGAGGTTGTCGTGAACACCTTCGGTAAACCATCGTACATAATGGGCAATATGAACGGGGAAAAGCACGAGTTGGGTTTAAACAACAATGCGGTTTCTCAGAAACGTACGTCGCCAGAGGTTCATTTGAATCCCATAGCTTTGCAGCCGTCCCAGAACTCCAGAAGCATGCTACTTGCGAATGAATCGGAGATTTACGAGTGCAATGATGTCATTAGCAATGAAGATAGTTCACCGGATTCTTCAGAATATCGCATAATATAGGAAACATTCACTGAGGAACTCGTGAGCGTGGTTGGTGCTCACACTCTAGGTgagatatttaaaatattcatctAGATTGAGGAGGAAGTAGGAGGGCAGACAGGGGCGAGGGGCGACCCTTCCTCCAATGGAGCATTTTCATCATTCTTTGTCGAAATGAAAAGGTGAACTGCTCCTATTGCCGATGTAAATATGTTCATAGATATGTTGAATTTTGAATTCTCAAGTGTACCGCTATGACTAAAAGTCAGAGGGACAGCACGTAGTATAAAACTAGTGTTTATTTTGAAACGACAAATTACGTTAAAAAATGAAGGTTTATGGGGGAGGCACActagtttttttttgcatggGGTATTTTCCAGCTCGAATCTCGAGTGTCAAGTTTTACCACAGAGAGCAGCCCAAAGTAGTGAGTTTAGTTCGCCCCGTTTACACAAGTGATTCTTCTTGCTGTGATTTTGAATGCGATCTTCCCTTTCCAAAGGATGGGAAGGAGTGAATGAGTTTATAAATGTTCCAGGTTGTGATATCTCCTACAGCATTATAAACCAACCTCCTTCGCTTCTTTGAAAGGAGAAAGTTGCTCAATGATATATTACGTAGAATAGAGAACAtagtttataaaaaatatttatttttcatgtCATTTTATTAGAGGTAATTTTTTCTGACTTGCGTAGTTAATATATGGATAGCATAAGAATTAAAGGCAATAAAATTTCGAAGATTTTTCTGATTGTAATATTCTAAGCAAGGTGTTATACTACCATCAGTGGTAAAACATTATGTACTAAACCATTATTTTATACTTTATTACAACTTATAACTTATTTCCAGTTACATTGATGCTATTTATGCTGCAGTTCCTTTAATCGTTTTTCATACAAAATGTTAAGACCATCTGATTTGTGTTCATTCCCTATTTCACTCCAAGCTTGATCTAACTCTTCAATATTCTGAGCATTGCTTAGCTGTCTCCGTACGAAGACAAGCTCC

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000327 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01414 all species →	DSL	Delta serrate ligand	Domain	Interproscan
PF00008 all species →	EGF	EGF-like domain	Domain	Interproscan
PF21700 all species →	DL-JAG_EGF-like	Delta-like/Jagged, EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan
IPR001774 all species →	Domain	Delta/Serrate/lag-2 (DSL) protein	Interproscan
IPR050906 all species →	Family	Notch signaling pathway	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24044 all species →	NOTCH LIGAND FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0007154 all species →	Biological Process	cell communication	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005112 all species →	Molecular Function	Notch binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000032332.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.