Gene detail

Detailed information of ENSAPQP00000032501.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3977678.1, Nucleolar GTP-binding 2 [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

ENSAPQT00000036360

ATGGCTAAAACATCGAAAAGAAAAGCTAAAATGAATCAAAAGAACAGAGAGAAGAGTAAGGGGAGTAGTACCAACCCAGAAGCTCACTCCAAGAAAGATGGTGGTCGAAATGCAAGAACCAAGAACACAGTCGCAAGACTGAACATGTATCGAGATGAGGGCAAACCTACAAGAAACAGACGTGGCAAAATTATCAAAGCTGCGGCATTTCAATCAAGGGCCACCCCAGGAGAGGTCGCACGTGTTGACCCCAATCGGAAATGGTTTGGAAACACCCGTGTCATTTCCCAAACTGCTTTGCAAACATTCCAGAGTGAAATGGGAAAAGTCATGAAAGATCCATATAAGGTTATCATGAAGCAGAGCAAATTACCACTTTCCTTACTTCATGACAGAGCTATGACATCACGGGTGCATTTATTGGACACAGAAAGTTTTAGCACAACATTTGGTCCCAAGGCACAAAGAAAACGACCTACAATAATTGCTGCTGACATGGAGTCTTTGGTTTCCCATGTCCAAGATTCTACAGGCAAATATGATTCAAGTAAAGATCAAGATCTAACTAGGAGTGAACCAGATTCCAAATCCCTAGCGATGGAGTCGGTCTTCAGTAAAGGACAATCAAAGAGAATTTGGAATGAGTTATACAAAGTATGCATTTTATTTAATGTACCATTTTATATTGATATGTTCTCACATgagttaattttttttgtgatCCAGGTTATTGATTCCTCGGACGTCATACTTCAGGTTCTAGATGCGAGGGATCCTCAAGGAACAAGATGTCTACAAGTTGAAAAATACCTAGCCAAAGAAAAACCGCATAAACATCTTCTCTTCGTCTTGAACAAATGCGACCTGGTACCAACATGGGTTACTCAACACTGGGTGACCAGCCTTTCTTCAGAATGTCCAACACTTGCTTTTCATGCTAGTCTGACAAACCCTTTTGGAAAAGGAGCCTTGATTAACACTCTCCGACAGTTTTCTAAGTTGCACAGTGACAAAAAGAATATCAGTATTGGCTGTATTGGATATCCCAACGTGGGCAAGAGTTCGATTATTAATACGTTACGGTCGAAAAAAGTTTGCAATGTTGCACCCATTGCTGGGGAAACTAAGGTTTGGCAGTATGTTACATTAATGCGAAGAATATTTCTAATTGACTGTCCTGGTGTCGTCTACCCATCAGGGGATTCACCGACTGACATCGTATTAAAGGGCGTGGTTCGTGTTGAGAATGTTGAAAATCCGTCTGACTATATCGAAGCAGTTTTATCACGAGTGAAGAAGGAATATCTTGCGAAGACCTACAAAATTTCATCTTGGTCGGATGCCACAGATTTCCTGGAAAAACTTGCTGCCAAATCTGGAAAATTACTAAAGGGCGGTGAAGCAGATATCAATACTGTTGCCAAGATGGTGTTGAACGATTTTCAACGAGGAAAGTTGCCTTATTTTGTGTCACCTGCAACCCAGGATAAAACAAGTGAGAGTGACAAGACTATGGCCCGAATACCACCATTGGCGGAAAGTTTTGTGAAAAGCTCTACTGAAAATATTACTGATCATCATGTTACAGATAGTGACGTCACTACCAATGTGGTTGACGTCACTACCAATAATAACGATGATGTAATGAGGTATAAAGATATCAATACAGACATGTCAATCGACACAGGTGATGTTACGACGAAGGAATGCAAAGAGGTTTTGAAAGATACTGATGACAATTGTGCAGTGACAGAAGAGCACGATGACGTCATGGAAAATGTTGATGACAtcactgatgacgtcacaaatgATCAAATTGAACTAAAAGATACCTGTGAAGAGAATGAAACAAACAAGGATGTATCCACAGACTCAGCTGACAGACTGCCTCTAAGGGTGAAGCAAGATTTGAGGAAGATCAAGACTACAGTTGAGTTTGTTGAGGAAGATGTTCGTGATATCACTGGGGATGCTATCCATAAAAGTAttggtgatggtgataataACGATAGTGAtattggtgatgatggtgatgttgataaaaatattgGTGATGATTGTAATATCGATAGTGATATTTATATCAATAATATTGGTGATATCATTGagaatgatgatgatatttgTACTGATGGGGACCAAAGTGATCATGGTGATCTTTACGATGACAAGGAGGATAATAATAGCAATAATCGTGGTAAAATAAAGTGTGAAAAGGCAGCAGACGATGATGGTTCAAAAGTTGCACTGAAAAAGACGAAGAAACTTCCCAAAGGGCAAGGAAATAAAGCCAAAATCGTGGGCAAATTTAAACGAGAAGTGACGAGTAATCCGTTCAAGAAAGCTGTCGTGAAAGAAACCTCAGAAATATGTACCATAGAGATCGTTGATGATAAGAAAGGTAGGAAATTCTATTTTAAGCAAGACAAACAGAGGAAAAGGAAGTCGTTAGATGAAGAATGTGATGTTGTTGTACCAAAGaaaaaacaaaagtcgacacgaaaaatgaaaactggCGTTCATTATTATTCCGAAGTTAACGTGAAAAATAAGAATCGAAATAAGAAAAGCAGTTCTACTAACCAGCGGTCATCCAAGGGAAAAAAGAAACGGTCGTAA

Transcript

ENSAPQT00000036360

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q99LH1	Nucleolar GTP-binding protein 2 OS=Mus musculus OX=10090 GN=Gnl2 PE=1 SV=2
Q13823	Nucleolar GTP-binding protein 2 OS=Homo sapiens OX=9606 GN=GNL2 PE=1 SV=1
P53742	Nucleolar GTP-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NOG2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001361 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08153 all species →	NGP1NT	NGP1NT (NUC091) domain	Domain	Interproscan
PF01926 all species →	MMR_HSR1	50S ribosome-binding GTPase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR006073 all species →	Domain	GTP binding domain	Interproscan
IPR012971 all species →	Domain	Nucleolar GTP-binding protein 2, N-terminal domain	Interproscan
IPR023179 all species →	Homologous_superfamily	GTP-binding protein, orthogonal bundle domain superfamily	Interproscan
IPR050755 all species →	Family	TRAFAC YlqF/YawG GTPases, Ribosome Maturation	Interproscan
IPR030378 all species →	Domain	Circularly permuted (CP)-type guanine nucleotide-binding (G) domain	Interproscan
IPR024929 all species →	Domain	Nucleolar GTP-binding protein 2, circularly permuted GTPase motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11089 all species →	GTP-BINDING PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14537	NUG2, GNL2; nuclear GTP-binding protein	-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.