Detailed information of ENSAPQP00000032709.1 in Leptogorgia sarmentosa

Genomic Location: :...
NR annotation: CAB4019961.1, E3 ubiquitin- ligase TRIM71-like, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9CYB0E3 ubiquitin-protein ligase TRIM13 OS=Mus musculus OX=10090 GN=Trim13 PE=2 SV=1
Q5M7V1E3 ubiquitin-protein ligase TRIM13 OS=Rattus norvegicus OX=10116 GN=Trim13 PE=2 SV=1
Q32L60E3 ubiquitin-protein ligase TRIM13 OS=Bos taurus OX=9913 GN=TRIM13 PE=2 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12126DUF3583Protein of unknown function (DUF3583)FamilyInterproscan
PF07534TLDTLDDomainInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000315DomainB-box-type zinc fingerInterproscan
IPR021978DomainPML-like, coiled-coilInterproscan
IPR006571DomainTLDc domainInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR003649DomainB-box, C-terminalInterproscan
IPR047153FamilyTRIM45/56/19Interproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR25462BONUS, ISOFORM C-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

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