Detailed information of ENSAPQP00000033093.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3977492.1, RING finger 166-like [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8K243E3 ubiquitin-protein ligase TRIM68 OS=Mus musculus OX=10090 GN=Trim68 PE=2 SV=1
Q9C029E3 ubiquitin-protein ligase TRIM7 OS=Homo sapiens OX=9606 GN=TRIM7 PE=1 SV=2
Q61510E3 ubiquitin/ISG15 ligase TRIM25 OS=Mus musculus OX=10090 GN=Trim25 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009555 (this species only)
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species
Ubiquitin familyE3|E3 activity RING|U-box · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05605
all species →		zf-Di19Drought induced 19 protein (Di19), zinc-bindingDomainInterproscan
PF13445
all species →		zf-RING_UBOXRING-type zinc-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051438
all species →		FamilyRNF E3 ubiquitin-protein ligaseInterproscan
IPR017907
all species →		Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR013087
all species →		DomainZinc finger C2H2-typeInterproscan
IPR008598
all species →		DomainDrought induced 19 protein type, zinc-binding domainInterproscan
IPR027370
all species →		DomainZinc finger, RING-type, eukaryoticInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46016
all species →		ZINC FINGER, RING/FYVE/PHD-TYPEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000209
all species →		Biological Processprotein polyubiquitinationInterproscan
GO:0006511
all species →		Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSAPQP00000033093.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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