Gene detail

Detailed information of ENSAPQP00000033196.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB4008615.1, receptor-type tyrosine- phosphatase F-like [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

ENSAPQT00000037127

ATGAAGAGCAGTGTAGCTAACAAATCATGGCTCTgtttttttgcattgtttAGTTTTTCCCTAAAAGGCTATTTGTGTTTATTTCTGAAGCACTCAGGTGGTGGATGTTTGCGTAGTTCATCTTCAGCCCATCTCATGACAAAATGGGCCAAGGTTTGGTATTTGCAGCTGAGCAACGACTGTACGGCTCCTGAGGCTCAATTTCGTTTCCTACAAGAGGGAGTTTTGCAACATGTTTCTTCGTCAGGCTGTGTTCTCCCACTAGATGGCAAAACATCGCCTAAAGTGGGGACAAAGTTGGTCGTTTTTGCTGCCAAAGATGCTTGTGCAAACAAGAGTGAGCAAGCTTACACCCAGACTCCCGGAGGCTCGCTCAAACATGCAAGCTCAAAATGCATTCAACCACACACATCATTTGGGTTTGCTCCTGCCGCGAACGCTCAGATTGAGTACACGGCGACCTGTAATAAAACACTCCAACGCTTTGTCTTAGGTTCAATCACGTGTGAAGGCAACAGGGCAAAGGACATCGTGTGTCCTGCTTCGCAGGTTATCAAAGTCATAAAAGCAAACTATGGTGGCTACGGATCAATCAAGACTTGCGGTTATAACAGGAATTACAACTGTTTGTTGTTGTCAGCATTGTGTCACGTGAAGCGGGCATGCAATGGACGACAGAACTGTGAAATTGACGTCACAACGGATGAATTTCAACATGATTCTTGCCCTAGTATGAAAAAATACCTTTACGTGGAATATAAATGCTTGGATAGAAATGCATTTAGGACGGAAAATATGTTGAttaaaAAAGTGCGACTTGCTTCAGAATCTGAACCTGGTCGAGGTTTTGTTGAAGTGCTAGAAGAGAGCAAACCAAATTCCTGGCAACGCTTGTGTGTCGAAGACATGAAAGCCACAGAGAAATCTGTGATTTGTCGAACTCTTGGTTATGCTGGTATAAAAGTCctagaagaagaagaagactCCAGTGTTGGCAGCGGTCAGGAGATTGCAGAAACTGTGGGAATGCCTGTTCTTCGTGGTGATGTGTATTGCAGCAGTCAAGATCAGAATATTTCTTCGTGTTGTCTGGAGAAAGTCGACTCGGAAGAAAGTTTGTGTTCAACACTGGTGCACGTTTCATGTGCAATTTGCTCTGAACCAGTTCTGAGCAGAAATCACCATCCAGCTGTCGTATTCAGTTCCTCTAACACTTTGTCAGGTCATTCTCCTCACCAAGCCTCAATGACCAGTGACTCCACGTGGTGCGCGAGTGACTCACTTGAGCCACGTGACTACCTGAAAATTGACCTTGGCGAGGCGTACGTCATCGGGCAGCTAGCGATTCTGGGAAATGCCTCGGGAGGGAACTGGGTAACAGCCTACGAAGTGTTGTATTCTAAGGACGAAGGTGATTGGTTGCCTGGGATTGCTAATGCGAAAAATCGACTAATTGGCAACTCCGCCAGTCACAAACTGTCAATCGTCACATTTGACATCGCGTTTCAAGCAAGATTCAtcaaaattttaccaaaatcaTGGCACGGTCTTCCATGCTTGAAACTAGAAATCTGTGGACACAAGCTTCTACCAGACGCTCCAAGAAATTTCACTTTACGCAGAATCACTGCATATACCGCTGACCTGACGTGGATAAGACCTGCAGACTCAGGCGATGTACCTTTTACACAATATCAAATCAGTTTGTTCGAAGATGGGGAGTTGAAATTGAACATTACAACCAAAACTGAGTCGTGGCATTTCCTTGCTCTAAGACCTTACACGAGATATACTGTGACAGTCCAAGCTGGTAATGACCATGGCTTCGGTCCACCTGCTGTCTTGACGTTCAGAACCAACCCTACAGCGCCCACTGCTCCGCCATTTGACGTCAAATTATCAGCCATCAGTTCCAGTTCACTCAGTATTTCTTGGCAAGCACCGCCATCCTTTCACAGAAACGGAATGATAATCGGCTACGAAGTTTGTTTTTCGTGGGTAAAATCACGTGAACAATGTGATCGCATAATAAGAACTGCAACGAAAAGTGTTCGCCTGGGTTACCTGTTGCCAGCCACGCAATACAGGGTGAAAGTTTTGGCGCGAAATGACGCGGGATCTGGGAACTACAGTGAAGAATATCTTCAGATCACAAATGCAGAGTCTCCTGTCTGCAACCATTCTTCAATAACAGCTGAAATGATCGTTGTGAAACTACAAAAACCCAGAAAAGAAGTCAGTTTCTGTCAAGTGATGGTACTTTCTCTACCCAACGACCACAGCTTTCCAGATCAAAGTATTTTCTCCGCTAAAGCTGCAACTTATCTTGATTCATCTGGTTCTCCTGTGCCCTATATTACCGCCGAATTTCAAGCTtcagattttgaaaaatatcaagacTTTACTGTTGGAGATAGTGCGGTATTTTCTGCCCTGTCAATGTTCAATACTACCAGAGACCAAGtcgagaaatatttcaatggtCCATTGACGCCAAACACGCGCTACACGGTCTTCCAGAGATTTCTTTCCGATACGAAGTTATTGTACTCCTCGGACCCACTTGCTCCTGTGAAGACAAATGAAGTCATAATAACTGAGACTACTAATTTTTCAGTGCCTCCAGACAAGCCGCCAcgaaatattcaaataaaCGTCAAAAGTTCAACGTCTCTTAACGTTTCATGGAAGGAACCAGTTCTCGGAAACAGTCAGAGGATAATGGGGTACCAGGTTTGCATTGCGAATGTGCAATCCGATGAAGAATGTGAGGTAATATTGAGGACGAAAGCCTTCACGTGTGTCTTGAGTGGTTTAAAGACAGCCAGTGAATATAAAGTTCGAGTTTCCGTAAAAAATGAGTTTggatatggaaaatatagcAAGGATTACGTTACCATGACTAATGCAGCACCACCGTTAGTAATTCCATCTACGATAACTGAAGATAGTTTCGTTGTAAGATTACAGCCATCCAGAAACGAAATCAGattctGTCAGATTGTGTTGATCACATCACCGAACAATGTCAGTCTTTCTACCTCATCTCATTACCTGAAGAATTACAATTCTTATTACGACGTCCAAGCAAGTGTTTCGCCTTCTTCGTACATCGCTGCAGAGTACGATGTTGTAGAGTTTAAGAAGTACCAAGAGTTTACTGTAGGTGATGGTAGTGTTACTTTGGGTGTGGTTGGAGTGTCCAAGGATGGTACTGCTACAAGGAAGTATTTTAACGGACCGCTGTCCCCAGGCACCGTGTacactttatttcaaagattTTACGACGGACAGAATCTGGTCTATATTTCTGATTTCCTTCCTCCAATCAAAACAAGGCAGAAAGACAACCTGGATCAATTCAAAGGACAACAGGCTGAGTCCAAGACCTCAGAAGAAGACTTCAGGCTGCCTTTTATTCTTCTTATTGTGGTTTTGTTAGTTACTTTGCTAATACTTGGTGTAGTTGTGATTTATAGACGACGAATGCAACGCAACAATCTTCACAGTACGACAGATGCAAGGACAAGTGATACGGTGGCTCAAACACAGCACGAAGATGATCAGGAAACCACGCCAGCCAGGGTTTGA

Transcript

ENSAPQT00000037127

ACCACGGCAGCTTGTTCTGAAATGATCAAAAGTTCCTATTATATAGATGTCGTTCAACACTGTTATATCATGTGATCGTGATCTGAGATGCATCTCATAATCGTGTGAATTTTGCCTTCTCCTTTGTGCAATGAAACGttaaattattgaatgaaCACAACCCCCCATGTTGAGATTTAATTGCAATTCGTGTAGATGTAACTTTGcatgaaattaaacttttataGTTCTATTTTCTAGTTCTGGTTTCCTGCGGAGCTGAGACGCTTCTGTAGGAATAAGGCTTGGACGTTCTCATCATGAAGAGCAGTGTAGCTAACAAATCATGGCTCTgtttttttgcattgtttAGTTTTTCCCTAAAAGGCTATTTGTGTTTATTTCTGAAGCACTCAGGTGGTGGATGTTTGCGTAGTTCATCTTCAGCCCATCTCATGACAAAATGGGCCAAGGTTTGGTATTTGCAGCTGAGCAACGACTGTACGGCTCCTGAGGCTCAATTTCGTTTCCTACAAGAGGGAGTTTTGCAACATGTTTCTTCGTCAGGCTGTGTTCTCCCACTAGATGGCAAAACATCGCCTAAAGTGGGGACAAAGTTGGTCGTTTTTGCTGCCAAAGATGCTTGTGCAAACAAGAGTGAGCAAGCTTACACCCAGACTCCCGGAGGCTCGCTCAAACATGCAAGCTCAAAATGCATTCAACCACACACATCATTTGGGTTTGCTCCTGCCGCGAACGCTCAGATTGAGTACACGGCGACCTGTAATAAAACACTCCAACGCTTTGTCTTAGGTTCAATCACGTGTGAAGGCAACAGGGCAAAGGACATCGTGTGTCCTGCTTCGCAGGTTATCAAAGTCATAAAAGCAAACTATGGTGGCTACGGATCAATCAAGACTTGCGGTTATAACAGGAATTACAACTGTTTGTTGTTGTCAGCATTGTGTCACGTGAAGCGGGCATGCAATGGACGACAGAACTGTGAAATTGACGTCACAACGGATGAATTTCAACATGATTCTTGCCCTAGTATGAAAAAATACCTTTACGTGGAATATAAATGCTTGGATAGAAATGCATTTAGGACGGAAAATATGTTGAttaaaAAAGTGCGACTTGCTTCAGAATCTGAACCTGGTCGAGGTTTTGTTGAAGTGCTAGAAGAGAGCAAACCAAATTCCTGGCAACGCTTGTGTGTCGAAGACATGAAAGCCACAGAGAAATCTGTGATTTGTCGAACTCTTGGTTATGCTGGTATAAAAGTCctagaagaagaagaagactCCAGTGTTGGCAGCGGTCAGGAGATTGCAGAAACTGTGGGAATGCCTGTTCTTCGTGGTGATGTGTATTGCAGCAGTCAAGATCAGAATATTTCTTCGTGTTGTCTGGAGAAAGTCGACTCGGAAGAAAGTTTGTGTTCAACACTGGTGCACGTTTCATGTGCAATTTGCTCTGAACCAGTTCTGAGCAGAAATCACCATCCAGCTGTCGTATTCAGTTCCTCTAACACTTTGTCAGGTCATTCTCCTCACCAAGCCTCAATGACCAGTGACTCCACGTGGTGCGCGAGTGACTCACTTGAGCCACGTGACTACCTGAAAATTGACCTTGGCGAGGCGTACGTCATCGGGCAGCTAGCGATTCTGGGAAATGCCTCGGGAGGGAACTGGGTAACAGCCTACGAAGTGTTGTATTCTAAGGACGAAGGTGATTGGTTGCCTGGGATTGCTAATGCGAAAAATCGACTAATTGGCAACTCCGCCAGTCACAAACTGTCAATCGTCACATTTGACATCGCGTTTCAAGCAAGATTCAtcaaaattttaccaaaatcaTGGCACGGTCTTCCATGCTTGAAACTAGAAATCTGTGGACACAAGCTTCTACCAGACGCTCCAAGAAATTTCACTTTACGCAGAATCACTGCATATACCGCTGACCTGACGTGGATAAGACCTGCAGACTCAGGCGATGTACCTTTTACACAATATCAAATCAGTTTGTTCGAAGATGGGGAGTTGAAATTGAACATTACAACCAAAACTGAGTCGTGGCATTTCCTTGCTCTAAGACCTTACACGAGATATACTGTGACAGTCCAAGCTGGTAATGACCATGGCTTCGGTCCACCTGCTGTCTTGACGTTCAGAACCAACCCTACAGCGCCCACTGCTCCGCCATTTGACGTCAAATTATCAGCCATCAGTTCCAGTTCACTCAGTATTTCTTGGCAAGCACCGCCATCCTTTCACAGAAACGGAATGATAATCGGCTACGAAGTTTGTTTTTCGTGGGTAAAATCACGTGAACAATGTGATCGCATAATAAGAACTGCAACGAAAAGTGTTCGCCTGGGTTACCTGTTGCCAGCCACGCAATACAGGGTGAAAGTTTTGGCGCGAAATGACGCGGGATCTGGGAACTACAGTGAAGAATATCTTCAGATCACAAATGCAGAGTCTCCTGTCTGCAACCATTCTTCAATAACAGCTGAAATGATCGTTGTGAAACTACAAAAACCCAGAAAAGAAGTCAGTTTCTGTCAAGTGATGGTACTTTCTCTACCCAACGACCACAGCTTTCCAGATCAAAGTATTTTCTCCGCTAAAGCTGCAACTTATCTTGATTCATCTGGTTCTCCTGTGCCCTATATTACCGCCGAATTTCAAGCTtcagattttgaaaaatatcaagacTTTACTGTTGGAGATAGTGCGGTATTTTCTGCCCTGTCAATGTTCAATACTACCAGAGACCAAGtcgagaaatatttcaatggtCCATTGACGCCAAACACGCGCTACACGGTCTTCCAGAGATTTCTTTCCGATACGAAGTTATTGTACTCCTCGGACCCACTTGCTCCTGTGAAGACAAATGAAGTCATAATAACTGAGACTACTAATTTTTCAGTGCCTCCAGACAAGCCGCCAcgaaatattcaaataaaCGTCAAAAGTTCAACGTCTCTTAACGTTTCATGGAAGGAACCAGTTCTCGGAAACAGTCAGAGGATAATGGGGTACCAGGTTTGCATTGCGAATGTGCAATCCGATGAAGAATGTGAGGTAATATTGAGGACGAAAGCCTTCACGTGTGTCTTGAGTGGTTTAAAGACAGCCAGTGAATATAAAGTTCGAGTTTCCGTAAAAAATGAGTTTggatatggaaaatatagcAAGGATTACGTTACCATGACTAATGCAGCACCACCGTTAGTAATTCCATCTACGATAACTGAAGATAGTTTCGTTGTAAGATTACAGCCATCCAGAAACGAAATCAGattctGTCAGATTGTGTTGATCACATCACCGAACAATGTCAGTCTTTCTACCTCATCTCATTACCTGAAGAATTACAATTCTTATTACGACGTCCAAGCAAGTGTTTCGCCTTCTTCGTACATCGCTGCAGAGTACGATGTTGTAGAGTTTAAGAAGTACCAAGAGTTTACTGTAGGTGATGGTAGTGTTACTTTGGGTGTGGTTGGAGTGTCCAAGGATGGTACTGCTACAAGGAAGTATTTTAACGGACCGCTGTCCCCAGGCACCGTGTacactttatttcaaagattTTACGACGGACAGAATCTGGTCTATATTTCTGATTTCCTTCCTCCAATCAAAACAAGGCAGAAAGACAACCTGGATCAATTCAAAGGACAACAGGCTGAGTCCAAGACCTCAGAAGAAGACTTCAGGCTGCCTTTTATTCTTCTTATTGTGGTTTTGTTAGTTACTTTGCTAATACTTGGTGTAGTTGTGATTTATAGACGACGAATGCAACGCAACAATCTTCACAGTACGACAGATGCAAGGACAAGTGATACGGTGGCTCAAACACAGCACGAAGATGATCAGGAAACCACGCCAGCCAGGGTTTGAACATGCTTTTCCATGATGCCTGCTTACTATTCTCTTTTCCACAGAAGTCCCAGGATGTCTGGAGAACAATTAATGACGTTTGCAAAGCGGAGAGATTGATTGCATGACGTGCATTGGTTTTGATAACACTGTCTTGTCAAATGAAATTGGTTAACATTAATCCGTGCATTAATTGATGTTACATGAAACAGTGTCACTGTTTTTGGGATAACAAAGCAATTCCCATATCAGAATTTCTTGAGAGCAAAACGTTTTCATTACTTTGTGCGGTGCTGAAGGCTAGATCTTTTTTGGTCAAACGGAATCGAAATACGTCCTTGCTTTCAACTTCATCCTATTGTTGTATTATTTGCAGTATTATCATAGATCAGTGATTATAAACGTTTATGTTAAGTTAAAATTTACTTTACTGATAAAAACAGCCTGATTGCTTAGGAGG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A4IFW2	Receptor-type tyrosine-protein phosphatase F OS=Danio rerio OX=7955 GN=ptprf PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000057 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02140 all species →	Gal_Lectin	Galactose binding lectin domain	Domain	Interproscan
PF00754 all species →	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan
PF00530 all species →	SRCR	Scavenger receptor cysteine-rich domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR000922 all species →	Domain	D-galactoside/L-rhamnose binding SUEL lectin domain	Interproscan
IPR051622 all species →	Family	Receptor-type Tyrosine-protein Phosphatases	Interproscan
IPR036772 all species →	Homologous_superfamily	SRCR-like domain superfamily	Interproscan
IPR017448 all species →	Domain	SRCR-like domain	Interproscan
IPR000421 all species →	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR043159 all species →	Homologous_superfamily	D-galactoside/L-rhamnose binding SUEL lectin domain superfamily	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR001190 all species →	Domain	SRCR domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24051 all species →	SUSHI DOMAIN-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0030246 all species →	Molecular Function	carbohydrate binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000033196.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.