Detailed information of ENSAPQP00000034306.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3995215.1, E3 ubiquitin- ligase RNF180-like [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006840 (this species only)
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13445
all species →		zf-RING_UBOXRING-type zinc-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR033263
all species →		FamilyE3 ubiquitin-protein ligase RNF180Interproscan
IPR027370
all species →		DomainZinc finger, RING-type, eukaryoticInterproscan
IPR017907
all species →		Conserved_siteZinc finger, RING-type, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46717
all species →		E3 UBIQUITIN-PROTEIN LIGASE RNF180Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000209
all species →		Biological Processprotein polyubiquitinationInterproscan
GO:0031227
all species →		Cellular Componentobsolete intrinsic component of endoplasmic reticulum membraneInterproscan
GO:0031624
all species →		Molecular Functionubiquitin conjugating enzyme bindingInterproscan
GO:0032436
all species →		Biological Processpositive regulation of proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0042415
all species →		Biological Processnorepinephrine metabolic processInterproscan
GO:0042428
all species →		Biological Processserotonin metabolic processInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSAPQP00000034306.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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