Gene detail

Detailed information of ENSAPQP00000034442.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3979287.1, gem-associated 6-like [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009382 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06372 all species →	Gemin6	Gemin6 Sm-like domain	Domain	Interproscan
PF20417 all species →	Gemin6_C	Gemin6 C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR046857 all species →	Domain	Gem-associated protein 6, Sm-like domain	Interproscan
IPR047574 all species →	Domain	AD domain	Interproscan
IPR009422 all species →	Family	Gem-associated protein 6	Interproscan
IPR046856 all species →	Domain	Gem-associated protein 6, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14710 all species →	GEM-ASSOCIATED PROTEIN 6	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000245 all species →	Biological Process	spliceosomal complex assembly	Interproscan
GO:0000387 all species →	Biological Process	spliceosomal snRNP assembly	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0032797 all species →	Cellular Component	SMN complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13134	GEMIN6, SIP2; gem associated protein 6	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.