Gene detail

Detailed information of ENSAPQP00000034462.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3992062.1, Hypothetical predicted protein [Paramuricea clavata]
Species abbreviation LSARM · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005750 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09011 all species →	HMG_box_2	HMG-box domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036910 all species →	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR009071 all species →	Domain	High mobility group box domain	Interproscan
IPR050342 all species →	Family	High Mobility Group Box (HMGB)	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48112 all species →	HIGH MOBILITY GROUP PROTEIN DSP1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000976 all species →	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0008301 all species →	Molecular Function	DNA binding, bending	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11830	TFAM, MTTFA; transcription factor A, mitochondrial	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.