Detailed information of ENSAPQP00000034619.1 in Leptogorgia sarmentosa

Genomic Location: chr8:1508819...1510771
NR annotation: XP_028414227.1, POU domain, class 3, transcription factor 2-A-like [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q17237Silk gland factor 3 OS=Bombyx mori OX=7091 GN=SGF3 PE=2 SV=1
P16241POU domain protein CF1A OS=Drosophila melanogaster OX=7227 GN=vvl PE=2 SV=5
P56224POU domain, class 3, transcription factor 3-A OS=Danio rerio OX=7955 GN=pou3f3a PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001828 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046
all species →		HomeodomainHomeodomainDomainInterproscan
PF00157
all species →		PouPou domain - N-terminal to homeobox domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010982
all species →		Homologous_superfamilyLambda repressor-like, DNA-binding domain superfamilyInterproscan
IPR001356
all species →		DomainHomeobox domainInterproscan
IPR000327
all species →		DomainPOU-specific domainInterproscan
IPR050255
all species →		FamilyPOU domain transcription factorInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017970
all species →		Conserved_siteHomeobox, conserved siteInterproscan
IPR013847
all species →		DomainPOU domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11636
all species →		POU DOMAINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0003700
all species →		Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSAPQP00000034619.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP