Gene detail

Detailed information of ENSAPQP00000034634.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3995971.1, ATP-binding cassette sub-family B member 7, mitochondrial [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

ENSAPQT00000038693

ATGAATAAATTAAGTATGGCAGCGAAAATAACCAATATTCGCTCTTGTTACGCCTTGTTAAATTATGGATATTGCACACAAAAAATTGTATCTTCTGCTCATCGAGGATTACTTCTTAGTCCTTACATACAAGCTAAGCCAAGGCTGTACTTGTGTCGAAAAACCACCCATTTACCATCTTCCCAAGCAACTGATAATAGCAAGAAACCACAAATTACAAACAGTTTAAGCATCATTAAAAGTATGTTACATCATGTCTGGCCAAAGGACCGAAATGATTTGAAGATCAGGGTTGTCTTTGCTATTTCATTACTTGTTGGATCAAAGaTTTTAAATGTCCAAGTTCCATTCTTATTCAAATATGCAGTTGATCATCTGAACAATGTTGCACCATTAATGGACACTGCGGCTGGTAGCGCAATGACACTGACGACAGCATTACTGCTTGGATATGGTGCTGCACGAGCTGGTGCTTCgctgttcaatgaattaagaAATGCTGTGTTTGCTAAAGTAGCACAAAGCTCTATCAGAACTGTTGCCAAGAGAACATTCTTGCATTTACATAACCTTGATCTACACTTCCATCTCTCAAGACAAACTGGTGCTCTTTCAAGAGCAATTGACAGAGGAACAAGAGGTATCAACTTTATGCTAACTGCATTGGTATTCAACATTTTCCCAACATTATTAGAAGTTTCTTTGGTCACAGGAATTTTGGCATACAAATGCGGGAAGGAATTTGCTCTGGTGACATTGACATGTATAACTGCTTATACTTTCTTTACATTTGGTATTACTCAATGGCGGACAAAGTTTCGTATTGAAATGAACAAAGCAGATAATGAGGCCGGATCCTTAGCTATTGACTCCTTACTCAACTATGAGACTGTTAAGTATTTTAACAACGAGCAATACGAAGCAGAAAGATATGACAAATTATtagaaaattatgaaaaagcaTCTTTGAAGACTAGCACAAGTTTATCGATGTTGAATTTTGGTCAAAACGCCATATTTAGCTCTTCTCTTGTTGCAGTTATGTTGTGCGCTAGCAGTCAAATAACAGCAGGAACAATGACAGTTGGAGACCTTGTGATGGTCAATGGCCttttatttcaactttcattgCCTTTAAATTTTCTTGGTACTGTATATCGTGAAATACGTCAATCGTTAATTGACATGCAGGCACTGTTTGATTTACGTAATGTCAAATCACAAGTTACGGAGAAACCCGATGCATATCCTCTCATCCTCAAACCAGGAGATCCCAATGCTCATGTAAGATTTGAAGATGTTCACTTCAGTTACGTTGACGGCCAGAAGATCTTGGATGGCTTAAGTTTCGAGGTGCCATctggaaaaaaaattgcaattgttggAGGAAGTGGTTCAggCAAATCAACAGTGATTCGTTTGTTGAATCGTTTCTTTGATCCGTCTGATGGACGAATATTGGTAGGTGGACATGACACCCGGAATTTGTCATTGGACAGTCTACGTCAGGCTTTGGGGATTGTTCCACAGGACTCAGTGTTATTTCACAACACAGCTTTCTACAACATCAACTATGGAAGAATTGATGCAACTGCTGATGAAGTTTATGAAGCTGCAAGACTCGCAGATATTCATGACCAAATCCGACGTTGGCCCAAAGGTTATGACACTCAGGTGGGCGAGCGAGGTCTAAAGTTATCCGGAGGGGAAAAACAACGCATTGCTATCGCTAGGGCGATATTGAAGAAACCACCAATACTTCTTTATGATGAGGCTACTTCATCATTGGATTCTATAACTGAAATGAACATATTGCAAGCCTTGCATCGTTTCACAAAGGACCGAACATCAATAGTCATTGCACATCGATTGTCGACAGTGCTGGATGCTGACGAGATCTTGGTTCTGGAACATGGGCGTGTCATGGAACGTGGTCGTCATGACGACCTATTAAAGAACACTTCTGGTCTCTATGCATACCTCTGGAGTAAGCAATCTCAGGGATATTCTAGGATTGCAGGGGATAGGACTTCAGAAACAGAGTAG

Transcript

ENSAPQT00000038693

CTGGTGTTTTTCAGTTGGGAAAGATTTCGCGACCTACCTTGGCATTTTTTAACCTTGATTTGCTTGTGAATCCATCAGCAACAATATTTGTAGCCATAGAAGTGGCCATAGTATTTCTCTCTCCTGGATATCTTTACCTCTGTGTTTTATGCAAAGAGAATAGCGTCCGTGATGTTTTATCTTGATCCAAGGCTGTTTTTTATCTCATAGCAACAACACCATCAACAATTGATGACGTTCGCGTAGCATAGCAACGGCGAGAAATTCCGATTACGATACGAAGTTGATCCGAGGATTTGATGAATAAATTAAGTATGGCAGCGAAAATAACCAATATTCGCTCTTGTTACGCCTTGTTAAATTATGGATATTGCACACAAAAAATTGTATCTTCTGCTCATCGAGGATTACTTCTTAGTCCTTACATACAAGCTAAGCCAAGGCTGTACTTGTGTCGAAAAACCACCCATTTACCATCTTCCCAAGCAACTGATAATAGCAAGAAACCACAAATTACAAACAGTTTAAGCATCATTAAAAGTATGTTACATCATGTCTGGCCAAAGGACCGAAATGATTTGAAGATCAGGGTTGTCTTTGCTATTTCATTACTTGTTGGATCAAAGaTTTTAAATGTCCAAGTTCCATTCTTATTCAAATATGCAGTTGATCATCTGAACAATGTTGCACCATTAATGGACACTGCGGCTGGTAGCGCAATGACACTGACGACAGCATTACTGCTTGGATATGGTGCTGCACGAGCTGGTGCTTCgctgttcaatgaattaagaAATGCTGTGTTTGCTAAAGTAGCACAAAGCTCTATCAGAACTGTTGCCAAGAGAACATTCTTGCATTTACATAACCTTGATCTACACTTCCATCTCTCAAGACAAACTGGTGCTCTTTCAAGAGCAATTGACAGAGGAACAAGAGGTATCAACTTTATGCTAACTGCATTGGTATTCAACATTTTCCCAACATTATTAGAAGTTTCTTTGGTCACAGGAATTTTGGCATACAAATGCGGGAAGGAATTTGCTCTGGTGACATTGACATGTATAACTGCTTATACTTTCTTTACATTTGGTATTACTCAATGGCGGACAAAGTTTCGTATTGAAATGAACAAAGCAGATAATGAGGCCGGATCCTTAGCTATTGACTCCTTACTCAACTATGAGACTGTTAAGTATTTTAACAACGAGCAATACGAAGCAGAAAGATATGACAAATTATtagaaaattatgaaaaagcaTCTTTGAAGACTAGCACAAGTTTATCGATGTTGAATTTTGGTCAAAACGCCATATTTAGCTCTTCTCTTGTTGCAGTTATGTTGTGCGCTAGCAGTCAAATAACAGCAGGAACAATGACAGTTGGAGACCTTGTGATGGTCAATGGCCttttatttcaactttcattgCCTTTAAATTTTCTTGGTACTGTATATCGTGAAATACGTCAATCGTTAATTGACATGCAGGCACTGTTTGATTTACGTAATGTCAAATCACAAGTTACGGAGAAACCCGATGCATATCCTCTCATCCTCAAACCAGGAGATCCCAATGCTCATGTAAGATTTGAAGATGTTCACTTCAGTTACGTTGACGGCCAGAAGATCTTGGATGGCTTAAGTTTCGAGGTGCCATctggaaaaaaaattgcaattgttggAGGAAGTGGTTCAggCAAATCAACAGTGATTCGTTTGTTGAATCGTTTCTTTGATCCGTCTGATGGACGAATATTGGTAGGTGGACATGACACCCGGAATTTGTCATTGGACAGTCTACGTCAGGCTTTGGGGATTGTTCCACAGGACTCAGTGTTATTTCACAACACAGCTTTCTACAACATCAACTATGGAAGAATTGATGCAACTGCTGATGAAGTTTATGAAGCTGCAAGACTCGCAGATATTCATGACCAAATCCGACGTTGGCCCAAAGGTTATGACACTCAGGTGGGCGAGCGAGGTCTAAAGTTATCCGGAGGGGAAAAACAACGCATTGCTATCGCTAGGGCGATATTGAAGAAACCACCAATACTTCTTTATGATGAGGCTACTTCATCATTGGATTCTATAACTGAAATGAACATATTGCAAGCCTTGCATCGTTTCACAAAGGACCGAACATCAATAGTCATTGCACATCGATTGTCGACAGTGCTGGATGCTGACGAGATCTTGGTTCTGGAACATGGGCGTGTCATGGAACGTGGTCGTCATGACGACCTATTAAAGAACACTTCTGGTCTCTATGCATACCTCTGGAGTAAGCAATCTCAGGGATATTCTAGGATTGCAGGGGATAGGACTTCAGAAACAGAGTAGGAATAAAGTTAACTATGTATTTCCTAAAGATGCCTGTGAATTGAGAGTTAACTGCTGTTAAAAAGgcagttaaagttaactatgcTCGAGCCCTGGTGGTCTTGTTTTATCAACCAAACCTTGTTTAAAAAAACGCCGTCAAAAACCTTGTTAAACATAGCGCCGTGGAGCGAACAACATTTGTgaataagaaaacaatttttaaaatattttttaaaagcatttttacCTCTTTACCTTTGTTTCGTTTATTGAGTTTCGCGCCGGTTGAAAACAGCATCACATGTAAACCATTTTTTTTTCCGAAATAGATTGTATTTTTCCGCTGAAAGCTTCCTCGGAGACAAAGTACGACCTAAACTTTAATTTCTCGTGCATGTTTCACgaaaaaatgcatttaatATAACTTTTATTCGAGTTTTTCCTTCTAAAATTTGatacagtaaaattttgaacaaaattcccGCCTATTTTACGAAGAAACGAGTCCACAGAATTTGCTGGGCAGCGGTCGTTACGAGTCCACAATCATTCAGAATTTGCTGGGCAGCGGTCGTTACGTACACGACCCGTTACTTTATCTAACTCTGTGTTCAAGTGTCCCAGGCGCAGTTACCTGGGTTAATTAGCTCAACAGGCTATGGAACAACCGACTTTCGTGCTTGTTTttaacttgtttttaaaactttgtgtacacaataataattaatcaaaGGATGCAGCTGTAAATGAACCAGATAGTGTAAATGAACCGCCGCAAAAAGGACAGTTATCTTGCCTATAGTTCAGAAGCGGAAcctttcatgtgccgaacccaatgcaaatgagctcaaagaAAGAACTTaccattaacattaggttcggcacatgaaaagttcgacgccTGAACTGAGCCTTTTGAGATTGCACAAAGAATTTTAGCAGTCTTTATGTACTTTTGTACCATTCTCAGAGATGAAAACTCTATGCAATGATACTAAAACCGTAACCATCATTGAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
H2LNR5	Iron-sulfur clusters transporter ABCB7, mitochondrial OS=Oryzias latipes OX=8090 GN=abcb7 PE=1 SV=2
E7F6F7	Iron-sulfur clusters transporter ABCB7, mitochondrial OS=Danio rerio OX=7955 GN=abcb7 PE=3 SV=1
O75027	Iron-sulfur clusters transporter ABCB7, mitochondrial OS=Homo sapiens OX=9606 GN=ABCB7 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001447 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00664 all species →	ABC_membrane	ABC transporter transmembrane region	Family	Interproscan
PF00005 all species →	ABC_tran	ABC transporter	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR017871 all species →	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR036640 all species →	Homologous_superfamily	ABC transporter type 1, transmembrane domain superfamily	Interproscan
IPR011527 all species →	Domain	ABC transporter type 1, transmembrane domain	Interproscan
IPR003439 all species →	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR039421 all species →	Family	Type 1 protein exporter	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24221 all species →	ATP-BINDING CASSETTE SUB-FAMILY B	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0140359 all species →	Molecular Function	ABC-type transporter activity	Interproscan
GO:0005743 all species →	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0006879 all species →	Biological Process	intracellular iron ion homeostasis	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan
GO:0042626 all species →	Molecular Function	ATPase-coupled transmembrane transporter activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05662	ABCB7, ATM; ATP-binding cassette, subfamily B (MDR/TAP), member 7	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.