Gene detail

Detailed information of ENSAPQP00000035645.1 in Leptogorgia sarmentosa

Genomic Location: chr8:2948649...2961545
NR annotation: XP_028414089.1, osteopetrosis-associated transmembrane protein 1-like [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ENSAPQT00000039877

GGCACAAGAAGAAATGAAAGTTCATATTAATGTACCCCCCTGCTACAATAAGCTAAAAAGTGGGGGTTTTGCATTTAAACACAATTCAAGAACTAAATTTAAACGATAATAACACAGTTTTACTCATTCTTTCACATTTAACCGAAATAAAATGGTTTTAAAtggtaaaaaataaacaatttgtgAGTTTTCGATTCTATAATCAAACACTCAGGAGGGAGAATTCGTCGAAGTTCTATCATCATATGACAAGGAAGAGATCAATATGGCGTCCGAAAAAGGAGCTATTTTGTGAATAAATGCGGTTTATTTTGgcaaaaatgtttatattttcctTGTTACACGTTGTCATTTTATTCGTCAACTTGTCGAGCGGCAACAAAACGTACAACGATGCATTTTACTTCGACGAATTGCTCGAAAACCTGGGGAATAGAATCAAAACCGAATGTGCATATTTTTTGAAGACGTTCGCAAACGCGACTCAGCACTTCAACTGGTGCGTCGTGAAACATGCCAAACCCCTTCGGATGTGCGAGAAATGCACGTCGCAGTACACCGGACTGTTGAAGAGAAATCCTGTCAGCTCAAATCCCAACAGCAGTCACTGTGTTGATGAATTGGTCAGATCAGAACGGTTCCAAGTTGTGATGAAGGTGTACCAATTTCAAACTGGCCTTTGGGATTCGGCACATTGCGAGAaatgttACGAATCTCATTGGAATCTGACAAAGCACACTCGAGAGTTCTTTCACAGACTGGAGAGAGTCAACACTTGTTTTGACAATTACACAAGAATACATCAGGCCAACAGGTCAACAGACTTATGCGATGCTTGCAGACGACACTACCTGAGTCTGAGGCGCATGTACAGTATGATTTTGGAGGAGACTACAGATCATAAGGAGGAGGATGAACTGTGCGTGGACATAATGTCACTGATGAACGACACGCGACGTGATTGGACcaattttaattgcaacaaggtgaaagaaaagaattaTAAAGTGTTGTCATTGAGTGGCATGTTTGGCTTCCTCACGTTCATTTATTACGTTGCCGTGAGAAAACACGAGAAATACAAAAGTAAACTACAATCAAGATCCCGAAGAGCCAAACAAATCGTCAATTATGATTCGGAATGATTCTCGATGAATTGGTTCTTGCCACGGAACAATGTTCGAATCATCATGGAATGAATGAGACGGTATGGTCCGGCGTTGTGTGTGAATTTAGTTGCGTGGTCTATCCTTTTAACGTGTGATTACATGGTTCAACTAGTTTAATCTACAAACTAAAGAAAATACTGTGATTTGAAATCCACGCCCGGCAAATCGGATTAACCAATCGCAAATCGtaaatctttcattttttagaaTATTTTTAACTAGGTCGAGGATTtcattgaattgtatattgtacatgttcggtcaatttttttcaaattcgcCGAAACTTCCACGAAATTCCTAGAAATTCGAAATTCCATATTAATTCCTGGAATGAAACAGTCTCTCAAATTGCATAGACGCGTGATGATTTTGCAATAATTCCCACGCAAGCAAAAGGTGTCCGATTTTTTGGagttattaattaattgacAGGGTTATTATCATTGACTGGCCAAGATTGACAAATGATGGGAATTTTTTTCTGTGCGAAATGcaggttttaaaaaacaattttgaaaaaattatgaCTGTCACGTTCGATATAGCTTAGAATAGAAAATGTCATcctttcttttatttttatggGGCTACTGACAGAGTGTTTGTGTGGATTAATCGGACTTGCCGAGGTTGCAAATAATGGAAATTTTTCTGGGCGAAATATAGGTTTAAAAAGCAATATAGAGAAATGAATTTGatgcaaattatatttttttacataattattatatatattaaattgattttttaaagTCCATAATAAATATAGTAGTAGATATATAGTGATGGTATACTACAGTTGTTAAATGTCTATAAATAACAACCAGATTGTGGTTGAATCTTTTTTCGCTCATTTCTGCAAAAACAAACCTTCGACCGAGTTTTGGACGTATGCAGACTTTTTTGAAGTTCGTTTTACTTAAAACATAAAActaaattataaaacaaagCAGTATTGTTCGTGAATGTTAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BGT0	Osteopetrosis-associated transmembrane protein 1 OS=Mus musculus OX=10090 GN=Ostm1 PE=1 SV=1
Q86WC4	Osteopetrosis-associated transmembrane protein 1 OS=Homo sapiens OX=9606 GN=OSTM1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007058 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09777 all species →	OSTMP1	Osteopetrosis-associated transmembrane protein 1 precursor	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019172 all species →	Family	Osteopetrosis-associated transmembrane protein 1 precursor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15644 all species →	OSTEOPETROSIS ASSOCIATED TRANSMEMBRANE PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005829 all species →	Cellular Component	cytosol	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23863	OSTM1; osteopetrosis-associated transmembrane protein 1 (chloride channel 7 beta subunit)	-	Ion channels	ko04040	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.