Gene detail

Detailed information of ENSAPQP00000035843.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028396014.1, protein tilB homolog [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000040113

GTACccctgtgcggatggtagggaccttgacgaattcttttcggttttttcaccttttgctttttaacccttttacatGGTTGGTATGTTGAAAAACTAATACACGCATACGCAATGTACGTACGTACGTACGCGCATGCACAATGAAATGGGCGCAGCCAGTGTAAAAAGTGCGTGCactctccagtcttcttatagctcagtggattCGCCCTCTCGAGTGTCGCCGACATTTTTTGCGGCTAGTTGTCAGCGTCGCGCAGCAACATGCGAATCGGGTGGTAAACAAAATGGTGCAAATTACTGAAGATCTTGTTCGTAAAAGAGCAGAGCATAATAACTGTGAACTATCAACACTTGAGGAAGTTTCACTGCATCAACTGGACATTGAAAGGATTGAAATTCTGGATAAAGTTTGTCGTGAATTGAAAATTCTTTATTTACAAAGCAACCTCATTCCTAAAATTGAAAATGTTGGTCGATTGAAGAAACTGGAGTATATCAACTTAGCACTAAATAATATTGAAAGGGTAGAAAATTTAGAAGGTTGTGAATCATTACAGAAACTGGACCTGACTGTCAATTTTGTGGGAGAATTGACAAGTATAAAAAGCTTGGTAGTTAATTACCATTTAAAAGAATTGTTCTTGACTGGTAATCCATGCACACAATTCACTGGGTACAGAGATTATGTCATTACAACATTACCACAATTAAAAACTTTagatggaaaagaaattgaaagatcAGAAAGGATTCTGGCAAAACAGGAATACACAAATATTGTTGATGGCATCATTGACCAGGAAAACGCTTATAGAAAAGACATTgaGAATAAGAGGAATCAAGCAGAAAAAGAAGGCAACAGTTCTGACGCAGATCATTCGCTGAAgAATGGAACATCAGAAAAGGAATCAAATAACGATGAAGATGATGCAAGTTTCTGGCAAGAACAAGTGGAGTACACGCCTGAGTCTAGGACAGAAATCCATAAACATGTGGAAGAAAAACAACGAGAGAGGGAACAGAAGGATAAAAGGACAGAAAATGCCCCTAAAGAAGTGAGATTCTTTGCTAAAGATGGAAGACCTTTGAACATCAATCAAGGAAAGTTCGAGTTTAACTTCACAGACGACGAAGAAAACAATTCTTTTTTGTTTGACCTCGCTTGCCCGAaGTATCTTGACACCTCCTTGATCAACGTGGATCTCCAGACAACGTATGTACGAGTTACAGTGAAAGGAAAGATAATGCAGCTGGCATTACCAGAAGAAATTAAACCAGATTCCAGCAAAGCTCAACGTTCTCAGGTTACTGGACATCTCTTGTTGACCATGCCGAAGTTGAAGGGGATTGTTAAACCAAAGATTACAAAAGCGAAACTCAAAAAAGAGAAGAAGATTGAATCACCCAAAAGCGACAGAAGTAATCATCAAGCAAAATTGGAAGTGGACCCAAGTGTACGGAAAGAGATGGACTTTGGCAACATTGTACGAGAGAAGACTTGTAACAATGCACAGACAACAACACAGACCATCAAACAAACACTTGCTGATACAGAACAAAGTGAAGACTTTGTAGACGATCCTGATGTCCCACCGCTTATTTAGAATAAACCTCCCCAAGTAAGCATACTTTGAAGGAGTGACCCAGAGgtttcgtgaaaaaaactggaGCTGAAAGATGAGAAACACACCCCCACCCATCCTCCCTCTCCAACTACTATCACCTTGCTACCCCTCCCTCCATTGTATGAGATCCAGATGAACCAAGTTAACTGCCCTTTGGGAAAAcgtgatttcaaaatttcttaaGGAGATTCATTTATTATCTAAGGGTGTGATGATAGGAGGGGGTAATGTAGTGCCATGTGGTGCTTCTTTAAACTCACTACCAAACTAATAACTCGTACAATTATTGTGAATAAATTTGCAAACAATTTATAGGTTGAGAGTCCATGTGTTTATATTGGATATATATAGGTACTACATGTATGCTTTTTAATTCACCCCAGATGGCTTATAACAACTTAAAGATATCGAACTCATGGTTAATAATCATTAAGATTATTATAACTTTAATCTGGATTATACCAGCAAGCGGACAATTTCTGAAAGTGTGGAAGAAACTGCTATCCACTTTGGAAAACGCACTTCAATCTTTATTTAACCAAGCTAGTATGTTGTCGGTGTCATGTCCGTTGTATCTCCTGTGGTAAAACTGACACCGCTTTTGTTTATCAATTGCAGCTGCTTATGTGTGCACGGGGATTAATCGTTTCAACAGAAGCTGTCACTATGAGCTAAAACAGCAATTAGAAATTTCTAGCAGTTTGTTGAAACACTGTTTCTTGGAGCTAGACAGAAACGTTCATAGATCTTTCGCGGGTAGTTTATTCACGTGTCTAATCTGCTAGTCAATACACA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A0A1L8G016	Dynein axonemal assembly factor 11 OS=Xenopus laevis OX=8355 GN=dnaaf11 PE=3 SV=1
Q28FY0	Dynein axonemal assembly factor 11 OS=Xenopus tropicalis OX=8364 GN=dnaaf11 PE=2 SV=1
B3DH20	Dynein axonemal assembly factor 11 OS=Danio rerio OX=7955 GN=dnaaf11 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007096 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14580 all species →	LRR_9	Leucine-rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR003603 all species →	Domain	U2A'/phosphoprotein 32 family A, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18849 all species →	LEUCINE RICH REPEAT PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0036158 all species →	Biological Process	outer dynein arm assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19753	LRRC6, DNAAF11; dynein axonemal assembly factor 11	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.