Gene detail

Detailed information of ENSAPQP00000035917.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3995705.1, serine threonine- kinase Nek7-like [Paramuricea clavata]
Species abbreviation LSARM · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000040196

AGATGATGCAATTAGCTTTGCAAATGTTTAAAGTATTAAGGGCGTATGTCTGGAAAGATGATAAAGAAAGTATTTCGACCACAACATTTGGCTTGTTAGTCCAAAATTACCAAAAGCCTGCGCTAAAATTCTCATCGTTTAATGATGAGCTGAAGGCATTTCCAATAATTAACGACTAATTGACTTCTAATCAATTTCATGACGTTGTGactgaaatgttttaattGCTCATTAAACTTCATTAAGAACTTCATTAAACCTCACACGCGCGCAAACgcgaagtgaaaaaaattacaaaaatggCAGAGGGCACAAATTCGTTAGttgaaatgatgaaaaatcTTCGATTTGATATCCTGAACCCGGAGGAACCGGCCCAAAATGTCGCAACTACACCGAACCTGCAGGAGTCGTGTCGCAGGTCAATCATACGTGCGGTTGGTTTGGACCGTTTGTGCAAAGCTTCGGAACTTCCTGTTCCAAAACCGATGGTGAATTTCCTCGCGGGCGAGTTGTCCACAAACGATTTCTTTGTGAACAGAAACAGTTTGAATTCAGagaatatttcaaattgcatCTACCCTGCGCAATGCTTGCTGGACAATCGTACGGTCATGTTGAAGTGTATTGGACCAAGTATGCGTTCTCCTGAACTCACAAGCGCCATGAAATCCTGGGGCGACGTGGAGCACCCACACCTGATGCGATGCTTTGCGGAGTTCAAGCAAAACAAACACGATATCCTAATCTTTGAGCATGCGCCACATTCCTTCGCCGATATCCAGACGAAACTGCGCAATTCTAGCGGTTCCATCCCAGAGGACTTAATCTGGCGCGCATTTGCGCAACTGTGCGAGGTCTTGGTGTTTCTGCGTTCGCGTGGTTTGGAATACGAGAAATTGAAACCGGAATGCATTGCGTTCGACTCTGACGGGAATCTTAAGTTGGATAATCTGTTGCTGTACATGCCTTATAAAGAAGACGAAATGATGGACGCGATGGCGGTGGATGACGAGGGTCTTAAAGGGATATACACTTCACCTGAGGTAATCAACGAAGAGCCCTCCGATAAATCAATAATATGGACAGTTGGCTGTTGTGCCTACGAGCTAGCGGCATTGCGCCCTCCGTACGCAATACAAGGCACAGATATGTTCTCAGCTCTCAACGAAATCATGGAAGGCAATCCACCACCTCCAATCTCAGAGAAATATTCCGAAGATTTCCGAAACCTCGTCGATAGCTGCCTACGATCGGAAGCCGAAACTCGCCCAAGTATGGAAGAACTCTTGAGAGTAGCAAAAGAGAAGTCCGGCCAGGTGCAGGGCTCTATTGTTAGTTTATAAACTTTGGAGGTTTTTACTTAATCTGTAGCATACGTTTTTTAAGAAAACTTTTTTATCATGCGCAATTCAAATCTAAGGTACACAATGTAAAAATAAGGTTTTATGATTGATGAAACGCAAGACTTGTTCAAAACACCAAACTCTAACTTTATTGAAATTtgtacaataaaataaacatttttttcttgtagggtttaaattttgtaaaaaattatttgaaatattttatatccAGCAGCACTAAAATAGTGAATAAATAATTAGTATTCTAATTTATTCTAATTAATTCTAAGCATTTAGCTcgaataattatgcaaatcaTTCTCCGAAATAACTGACGTCATTCTCCCAAAAAACTGACGCACTTTACAGAGCAAAAATACATTTCCAAAGGAACGTACGCTTCACCAGACGAGGTGACGTCACGGGCCAAATAATTTGGGCTCTGTTGACCAATCATGTAAATGCAACTAAAACACCACTTGCGACATGTTGAGCATAATTTACCAGAATCGAGGAAATTGCAGAGATATTTTCCCACCATGTGTTGATTGTAATATACCCTTTCTCTTCTCACCACCTTCCCAGCATGCTCTTGTAATGTGTTGCATAAAAAGTTGTGAGAGGTAAATTTTTCTTCCAGTAAAAAACTGTTCGCAGATATATTCAATGCATCCAGGGTTAAATCTTTAAACACAGGCCATGGTAACACTGCCAATTGATTGTTACCAACGTTTAACGAACGAAGGTTTTTTAATTCTCCAATGTTACTTGGTAACGAGCCAAGACGATTATTGTCCAGTTTGACATTCACAAGTGAGGTCATTGCTCCGAACGCAATGGGGAGACATGACAGTTCGTTATTGCTCAAATCTAATGTCACTAACTTGCTAGTGCGACAGACTTTTGATGGCAGTCGAGTCAACTGATTTGAGGACAAATTAAGTGTCTTTAACAACTTCAAGCGCTCCAAAGACACATCAAAGTCCTTCAATTTAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9CAU7	Serine/threonine-protein kinase Nek2 OS=Arabidopsis thaliana OX=3702 GN=NEK2 PE=2 SV=1
Q9SLI2	Serine/threonine-protein kinase Nek1 OS=Arabidopsis thaliana OX=3702 GN=NEK1 PE=2 SV=2
A2ZMH2	Serine/threonine-protein kinase Nek2 OS=Oryza sativa subsp. indica OX=39946 GN=NEK2 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004749 (this species only)
Ubiquitin family	E3\|E3 adaptor Cullin RING\|SOCS · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF07525 all species →	SOCS_box	SOCS box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001496 all species →	Domain	SOCS box domain	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR050660 all species →	Family	NEK Serine/Threonine Protein Kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43671 all species →	SERINE/THREONINE-PROTEIN KINASE NEK	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000035917.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.