Gene detail

Detailed information of ENSAPQP00000036021.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3990448.1, synaptosomal-associated 47-like [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000040316

ttttattttgaaataatcaaaacaataatttgttCCGATCTTTTTCATTCATATCTTTCAAATCATGCTCGATTTctcttgaaattttcaatggaATACTATGTCATACAAGAATGGGGTGCCTCGTTTTACTGCTGGGAAGACAGGGTTTGGAAATACGGCAAATTAAACTTGTGTTCGAaatatgtttctttttatGAGAACACAAATTCCGAGCTCAACTCTGCCCCGAGTGTCACTGCCGATCTGCGTCGTATAACCGGCTTTCAAAGGCGACAGGTTTCTTTGATTTACAAAGCTATCGTTGTAGGTGTCGAAGGTGAAAAGCCTATGTGGTTTTCGTCTTTAACAAATCGTGAGGAAGTGTTCTATTTTTTGGATCATTTTTGGAAGCAACGTTTGCTGTGTTTGGGACCTGGTGGGGAACGAAAACAACAGAGTGACAGTAGTGAACCTTCAACCTCATCAGCAAAGCAAGCTGAAAGGCAAAAAATGTTTCAGATGTTGTACGATTCAGAGAACGAACTGATCAGAGCTTCGAATGCATTGTATGAGCAGGGAGAACAGTTAGCGAACTCATCTCGAACAATGAACAAAATGCATAAAGATTTAAATGTCACAGAAACGCTTGTGAATGGTTTAGACAGGTGGTTTACAAGCTGGGATATAAAGCCCGAGCATTATTTTGAAATCCGTACAAAAAAAGAATACCCTATTTTGTACAGGAAAACCACAAAGGAAACTTATTGTCCTGGTACATTAGTTTTTATTGAGGGGCAGGTCACAGTTTTGAATGTTAGACGTGTTGCAGACGTCTCGATACTACTAAAAGATTTGACCAGCATTGTTGTGAATACACCATGGAACATGCTCCTGCTTAGGTCAGCCATTGGCGAGGTTGATGTAGTTATAGATGTGTCATCGGCACAAGTCGTGTACATCCTTGAAGCACTTCAACCAGAGCATGGTCATAAATTTCATTATGAAGACGAttctgttgctgccaagcaaacgataaaaatttcagaaGTGCCTAACGTAGAACATTTTGTGACAGCAGATGGCGAAGCAGAACTTGGTGATGCAGACCTTGAGACAGCTGCTGATGTTGTGGGCAATTTAAAATCATTGGCTATTGGTATCAATCAAGAAATGACAAGACAACTTGACAGTTTGGATCAGCTCTCGGAGAGTGTGGATAAAGCCAACTTCCGGGTCAAGAAGAGCAACAAAAAAGTCGAGAGAAAGCTATAAATCAGAGAAAAAGTGGTTGTATAACGTCAATTTTTCTCATTCGCTGGTCCACAGTATGCACGGAGCGTAACAGAAAGGATGACGAGAACAAAAATGCAATTTACGATAATTCCGTCTTTTCCCCACCAAATTCTTAAAAGAATACTTAAAAGAAAACTTACACTCCATTCTCTCAAAGTTTACTTGTATATAACTCACTCGAAACTTAGGAGTTGAAATTTTTACTAAAGAACTACTaatcaacaaacagcagaAGTTCTAGTCACTATCCAAACGATACACAAAACGTGGGAATGGTGGcggatcttattgtatcgtttaggtagtgaatagaacgtttgctgcttgttgatgttgttattcgctacctacaATGACCACACTGGTATTTAAGACCTAAAGGTTGATGGTATATTATAATCGCAAATATGAGTATAAaatttgatgattttgatcaataaaaaacaatccGATTTTATCTTGAAAACACGTGCTCTTGCGGCAGTCCTTGATCAATAAAAACTAGCAAGCCATTAGTCACAACAACTTCTATATATATCTATTGTACTGTAATGCTAATATTATCACAAGATGGGAGTGGTTAATGGCTAAAAGTTGCTGGTAAACATGGTGTTTATCATCTAATGCGTCTCAGCAGGGGAAAAGCGCTTCCCATTAGCGTTCGATAGCCTGTTGTTTCCAAACAAAAGAGCGAGAATGGCCTTGAAAGCCCGACTCTGTACGCGAGGCCTTTATCCATTTGCCTTTCTGATTAAAAATGGCTGGAGTATTCACTGTTTACAATGTGACCGGAAGGCGTGGAGAAAAAGCTGTTGACATAGCTAATAGGGTCATTGGAAAGAAGCTCTGATAGGCATGGAACAATGTTCTAGTACTG

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006971 (this species only)

Pfam domain

No Pfam domain signature was detected for ENSAPQP00000036021.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR000727 all species →	Domain	Target SNARE coiled-coil homology domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19305 all species →	SYNAPTOSOMAL ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005484 all species →	Molecular Function	SNAP receptor activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006887 all species →	Biological Process	exocytosis	Interproscan
GO:0006906 all species →	Biological Process	vesicle fusion	Interproscan
GO:0016082 all species →	Biological Process	synaptic vesicle priming	Interproscan
GO:0019905 all species →	Molecular Function	syntaxin binding	Interproscan
GO:0031201 all species →	Cellular Component	SNARE complex	Interproscan
GO:0031629 all species →	Biological Process	synaptic vesicle fusion to presynaptic active zone membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18212	SNAP47; synaptosomal-associated protein 47	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.