Gene detail

Detailed information of ENSAPQP00000036081.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: RMX40728.1, hypothetical protein pdam_00015961 [Pocillopora damicornis]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

ENSAPQT00000040386

ATGGCTACCGGAACTTTATACACATTCCCGGACAATTTTCGGGcattcaaaattttgattgCCGCACAATACAGTGGTGCTAAAGTCACTGTCTCGCCGAATTTTAAACTCGGAGAGACGAACAAGACTACTGACTTTCTTAAAAAGTTTCCGTTAGGAAAGGTTTTTCTAAGCCACAACTTTGTCTATTTTCTCACAGTTGCCAATGCGCAGTTGAGGGGAAATAATGACAAGGATGCAGCTTTAATCCAACAGTTTATCAACTTTGCCGACAATGAAATCCTGCCATCTGCAGCGGCCTGGGTTTTCCCTACGTATGGCATAATGCAGTATAACAAACAGGCCACTGATAAAGCCATTGAGGAAATAAAGAAATGCCTAGCCTATCTTAATGATCATCTCTTGACAAGGACATTTCTTGTTGGTGAACGAATCTCCCTTGCAGATATCACAGTTGCTTGTAACTTGCTCATGCTTTATAAACAGGTATTAGAGCCACCATTCCGAGCACCATATGGTAACGTCAACCGATGGTTTACAACTGTCATCAATCAACCACCATTTAAAAATGTCATTGGAGCTGTTAAACTCTGTGAAAAAATGGCTAAATTTGATGCAAAATATCATTTcaaagcaaagccaaaagaaaaagacgATGAGGATGTCCCTAAGCCACCAAAGGAGAAGGATCCATTTGCTGATCTGCCCAAAACGACATTTGATATGGATGCATTCAAGAGGGAGTATTCAAACAAGGAGACCATTACTGAAGCTATTCCATATTTCTGGAAGCATTTTGATAAGGAGAATTGCTCAATTTGGTACTCGGAATACAAATATCCAGAAGacttaaaaatgatttttatgACTTGCAACCTGGTTGGTGGTATGTTCCAAAGATTAGGCAAGCTGGCGAAACACGGGTTTGGATCCGTTCTCATTTTTGGGGAAGATAACGATTCTTCTATTTCTGGAGTATGGGTGTTCAGAGGACAGAAGCTTGACTTTCAAACTGACTCTCCATCTTATGACTTCAAAAAACTGAACCCAGATGACGAGAATGATCGTAAACTGTTCAATGAATATTTGGCATGGGAGGGAGATTTCGGTGGCAAAAAAGTTAATCAAgCAGCTCTTTTACGTTTTAATCGAATAGATTCAACATGTCACGAATCTTGTCATATTTGTGCGACAGTTACGATTGGTTTGGAAAAAATCTGCGCTTTAGAATGCGAAAGAAAGTTTGCATGCAAAGTTCACCAAGGCAGGGGGcgaatatattttgaaatctcCCGTAAGGACCTTGCGAAAGTCAAGGATCTCCGGTCCGTTGAAAATCTTTTTGTAGTTGTAGCAGACATCGCATGTTTCGAATTTTCCGCACATCAAAACGTCGAGGAGACACTAGAGAGATTTTATCATCTTCCCGAACAACTTAATTGGGAATCTGCCATCCAAATctggaaaatattcaatgaatTTTCTTCTGATACCCCTGTCAAAAACTTTTTGCCCATATTGAATTTGAAGTCAGGAAGAACCGATACTAAACCAGCAACTGAGAGCGGGGACCCTGTAGAAAGCCTCAGTTCATCGGAAAAACCAACTGAGACAGACAAAGTTTTGCCACGGTTTAGGGTGACATGTACCCGAACTCATTCTGTACCAAGTCAAAAACATCTATTTACCTCCATGCAGGCAGCTGCGAAATTTGGTGGCGCTATAAATGACCTGTTTGGTTGGATAGTCGACTTGGAAAATTTCGACTTGGAAGTGTTGCTAAATATTGTAGATCaccatgttgttgttggtatTTCTCTGACAAAGGAGAGTTTATTCAAAAGAAATATTGTGAACTTTGGACCAACAACCTTGAGATCAACACTCGCATACTGTTTAGCACTTGCAGTTGATATTAAGAATGGAGATGTAGTGTGTGACCCGCTATGTGGCAGTGGAGCCATTCCCATTGAATGTGCTGTTGAATGGCCATGTTCATTTAACATCTGTGGCGATAATTTCCACTGTGCTCCTTCCAGAACCCAAGACAATGTCAACTATAAATTTCTGGAAATGGACACATTCCTATGGGATGCTTGCCGCTTacctttgaaaacaaattcaattgATGTATTCATCACGGATTTGCCATTTGGGAAGAAGAGCGGCTCAATGGTAAAAAACTGGCAACTATATCCTGAAGTTTTGTTAGAAATGGCACGTGTTTGTCAAGTGAAGACAGGACGAGCTGCAATTTTGACCAAAGATAAGAAAGCCATATCAAAAGCTTTTACGCAAACTGCTCAGTTTTGGCGAAAACGATTTACATATTGGATTAACATCGGAGGTTTACAGGCTGGAGTTTATGTCCTACAAAGAACAACAACTACAATATAG

Transcript

ENSAPQT00000040386

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q90YC0	Elongation factor 1-gamma OS=Carassius auratus OX=7957 GN=eef1g PE=2 SV=1
Q9D8N0	Elongation factor 1-gamma OS=Mus musculus OX=10090 GN=Eef1g PE=1 SV=3
Q6PE25	Elongation factor 1-gamma OS=Danio rerio OX=7955 GN=eef1g PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006559 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00647 all species →	EF1G	Elongation factor 1 gamma, conserved domain	Domain	Interproscan
PF02926 all species →	THUMP	THUMP domain	Domain	Interproscan
PF00043 all species →	GST_C	Glutathione S-transferase, C-terminal domain	Domain	Interproscan
PF02798 all species →	GST_N	Glutathione S-transferase, N-terminal domain	Domain	Interproscan
PF01170 all species →	UPF0020	Putative RNA methylase family UPF0020	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001662 all species →	Domain	Elongation factor 1B gamma, C-terminal	Interproscan
IPR036433 all species →	Homologous_superfamily	Elongation factor EF1B gamma, C-terminal domain superfamily	Interproscan
IPR004114 all species →	Domain	THUMP domain	Interproscan
IPR000241 all species →	Domain	Ribosomal RNA large subunit methyltransferase K/L-like, methyltransferase domain	Interproscan
IPR004046 all species →	Domain	Glutathione S-transferase, C-terminal	Interproscan
IPR050802 all species →	Family	Elongation Factors and Glutathione S-transferases	Interproscan
IPR004045 all species →	Domain	Glutathione S-transferase, N-terminal	Interproscan
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR036282 all species →	Homologous_superfamily	Glutathione S-transferase, C-terminal domain superfamily	Interproscan
IPR010987 all species →	Domain	Glutathione S-transferase, C-terminal-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43986 all species →	ELONGATION FACTOR 1-GAMMA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003746 all species →	Molecular Function	translation elongation factor activity	Interproscan
GO:0006414 all species →	Biological Process	translational elongation	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000036081.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.