Gene detail

Detailed information of ENSAPQP00000036730.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028414335.1, transcription initiation factor TFIID subunit 2-like [Dendronephthya gigantea]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

ENSAPQT00000041157

ATGGAGAAGAATTCCTTATGTATTCTTCCACTTCAAAGCAACCTAACTAAACTGAAGATATTTAGAGTTTGCGTTCAAGACGATAAAGCAAACAGTCTTTGGTTCGATGCTGGCTTTCAGCTTGATGATCCCGAGGAAAATATTTGCAGCGAAAGTAAAAAGAGGAATTTGGAACACTTTGCAAGCTCGCTTCAGAATGCTGTTTCGACAGTAGAACCTGAAAATGGTGGAGGTGAACTGACCATAAAACTGCCAAAGGAATCTCACAAATTTGTTtcagaaaagaaaacatttcgcTTGAGTATCGAGTTCTCGTTGGAGCATCCAAGAGGAGGAATTCAATTTGTTATTCCGGCTGGCAGTGGAACCATTGAAGAGAAATCTGCTCATATGTTCACATACAATTATGGAAATACATCCAGGTTATGGTTCCCATGTGTTGACTCGTTTTCAGAAGTTTGTACGTGGAAGATTGATGTGACAGTGGATAAGAACTTGTTTGCCGTTTCTTGTGGAGAGCTTGTCGAACAGGTGTATACTGCCGATGAGAGATATAAAACGTTTTCATATGTATTGGATGTGCCAACAGCAGCACCAAATATTGCGTTAGCAGTCGGGCCTTTTGAGATATACATTGATCCTGTGATGCCTGAAGTTACACACTTTTGTTTACCTGACTTGCTGCCGTTGTTAAAGCAGACGGTTGGCTCCCTGAATGAGGTGTTCGAATTCTACGAAGAATCTATGAGCTGTCATTTTCCATATTCAAATTACAAACAAGTCTTTGTCGATAATGCATTCGAGGAAACGTCTTCATATTCCACTTTGGCTATTTGCAGTATAAACTTGCTACATTCAAGTCGGATGATTGACCAAACCTTCCATACAAGAAAGATGTTGGCCCTTGCTTTAGCTCGCCAATTTTTTGGATGTTATTTATCTGTTCATACGTGGTATGTGTCAGATTCTTGGCTTCAGGCTGGTATAACAATTTACCTATATGGCCTGTATATGAAGAAAACGTTTGGTAACAATGAATATAGGAACTGGATACGAGAAGAGATGAAGAAGGTTTGTGAATATGAAATCGGTGGGCCAGGCCTGTTGCCTTTGCACAATAAGTCATCTTCACCAACGGACGAAGTTAGTTCTGATACTGACTCCGAAACCTTATCCAGTGTGTGTCGATTGCCGAGTTTCTTGCATATGCATCCACATTTGACGTCGTGTAAACAGTTAGAAGCCATGTGCAGTAAAGCACATCTGGTAATGAGATTGATTGAAATGAGGATTGGGCAAGAACCATTACTTCAGGTTTATAATAAACTTCTTTCACTCGCAAAAacggctgtcaaatcaaaagATTTGAATTCTTGGCGAAACATGTTATTGTCCACTACCGGGTTTCTTCGTTCAATCTCAATCGTCTCTGGTAAAGATCTCAACGTCTTCGTGGATCAGTGGATATGCAGGTCGGGAGTAGTATCATTTTCTGGCCAGTTTGTGTTTAATCGCAAGCGTAATATTGTGGAATTGGATTTGATTCAAGACTTGAGAAAGGGAACGTTCAAATATATGGGGCCGCTAACAGTTTGTGTTCAAGAACTGGATGGATCATTTAAACATACTGTACAAATTGAAGATAGTTCGAGTCGTCACGAGTTGCAGTGTCACTCCAAGAGTAGAAGCTCTGATTCCCCCGTTCTCTGGATTCGCATTGATCCAGAAGTGAATCTAATTCGCAAAGTGTCGTTTAAACAGTCTGATTTTATGTGGCATTTTCAACTGAGGCATGAACGTGATGTTATTGCTCAGGCAGAGgCAATAGAAAACTTGATGAGTTTTTCTACACGACAAACGATGACGGCATTTATAGACATTGCAAAGCAGAAGGAGTGCTTTTACAAAGTACGTCTCGATGCTATAGAAAGACTTTCCAAgCTTCAGAACGAAGGTGGCGAACCATGGAACACACATTTGTCTCTGATTTCAATGTTTCAAGACTTCTTCGGGTCTCAGACGTGCCCAACTGTTGTGAGATACAATGATTTCGCAAATTTCATCGACCATTATGTACAGAAGGTACTGTCATCGATTGGATTTTGTAGAGATTTACATTCGCAATGCCCAAAAACCGTTGTGCAGTTTCTCCTTGATTTACTGAAGTATAACGACAACAGACTAAATCTgTATTCTGACAGTGACTATGTGAGCGCGATTCTGACTGGTCTGGTTAATACTATTTCACCAACTGTGCCAATAGTTATTACTAACGGAAATGTACAATGTTATTATATAGCTACTATTTTGATGTTGACACAGGTTATCCTGGCtgaaattacaaaatatttaaatctgGAGAAACTTCTTCCGTCGTATAAGTATGTTATAACAACAAGTTGTTTGAAAGGTCTACGACTACTTCAGATAAATGGCCATGTACCATCCGATCCTGATgtgttcaaatattttgccagGTATGTTTGTTTGTTACATTTTATGCTTTCTAGTCATGCCATTCTGAGAACATTGACGGCGAATCCTCCATTTACAAAAAAGTCAAACTCATCTATGGATAATCTGGCCCTTGTTAACAAAATATGGAGCTATttaattgtatttttttatattagcAAGTGTTCATTGGATTCTCGATTAAGATGTGATTTTATGGATCTTTACAATGCTTTATGGGGAAGAGTCTCTCCTGGATGCGTTCCTACGCAAGGAATGGGAATACTTATTGATTTGAAAGAGAAAAGAATAACAAACTTTTCTTCACTTCATGCGCCTTCGAAAAGCCAGGTTTTTGAAGATTCACCAGGCGCTCCACCTTCGAAAGAATCTCATTCATCTTTCAATAGTGGAGCAAAACAATGGTGCAAACATTATACACTTAATGTCCGCTCGAGAGGGAAATAG

Transcript

ENSAPQT00000041157

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q32PW3	Transcription initiation factor TFIID subunit 2 OS=Danio rerio OX=7955 GN=taf2 PE=2 SV=2
Q5ZIT8	Transcription initiation factor TFIID subunit 2 OS=Gallus gallus OX=9031 GN=TAF2 PE=2 SV=1
Q6P1X5	Transcription initiation factor TFIID subunit 2 OS=Homo sapiens OX=9606 GN=TAF2 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002730 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17900 all species →	Peptidase_M1_N	Peptidase M1 N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042097 all species →	Homologous_superfamily	Aminopeptidase N-like , N-terminal domain superfamliy	Interproscan
IPR045357 all species →	Domain	Aminopeptidase N-like , N-terminal domain	Interproscan
IPR027268 all species →	Homologous_superfamily	Peptidase M4/M1, CTD superfamily	Interproscan
IPR037813 all species →	Family	Transcription initiation factor TFIID subunit 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15137 all species →	TRANSCRIPTION INITIATION FACTOR TFIID	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000976 all species →	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0005669 all species →	Cellular Component	transcription factor TFIID complex	Interproscan
GO:0006367 all species →	Biological Process	transcription initiation at RNA polymerase II promoter	Interproscan
GO:0016251 all species →	Molecular Function	RNA polymerase II general transcription initiation factor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSAPQP00000036730.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.