Gene detail

Detailed information of ENSAPQP00000036908.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3999085.1, arf-GAP with coiled-coil, ANK repeat and PH domain-containing 2 [Paramuricea clavata]
Species abbreviation LSARM · all data for this species · gene families

Sequence

CDS

ENSAPQT00000041348

ATGTATTTCAATGGTGATGGTGTGGTCACAGAATCCTTGGGAAAATTTACCAATGTTTTAGAAGAAGCTTTGTCTTATTTCATGATACTTATGGATCAAACACAGTGTTCAATTGCCAATGCTCTTCAGAAATTCCTGAAAGAGGAAATTAAGAAAGTGAAAGAAACTAAAaagatttttgacaaaatggGTTATGACCTAAGCAATGCATTAGTGAGGAATTCACAGTTGCCAAAAAACAGTAAACCTACAGAGATTGAAGAGATGAAAAACATTGTGACAGCAACAAAAGTTGGTTTTGACCATTTGTCATTGGATTACACATTTCAAATCAATGTTTTGCAGTcaagaaaaagatttgaaattttagatgTGATGTTGGCATATATGCATGCACAGTACACATACTTTCATCAAGGGTTTAATTTGCTCAAAGAAATTGAACCACAGATGCGCTCTCTTGGAAAGCAGCTCGAGGAACTCTCTGTATCATTTGTGGCAGAAAAAAAAGAGATGGAAGGAAGGCATCAACTTGTGCAGGGAAGGGAAGATTCTTTGTTTGCAACAGTCGGTCCTGTTCCATCTTCCAATGACGTTATTCTAGAAGGATATTTATTCAAAAGAAGTAAGAATGCATTTAAAACGTGGCAAAGGAGATACTTCACGATACAAAATAACCAGTTATTTTACCAACACAAATTCAAGGATGGAAAAACTGTCCTTGCAGAAGACTTAAGACTGTGTAAGATCCGAGAATCAGAAGATATAGATAGAAGATCTTGTTTTGAACTGATATCTCCAACCAAGCTGGTCATCCTTCAAGCTGACTCGAGGGAGTTACAAAACATGTGGGAAAATGCCATGAAGGTCAGCATAGATCATGCATTTGGTTTGCCACATCTGGATGTAAATGATGAAGAGGATTCACAAATCTCAAACAACACATTTCTATCTATTCCTGTAACAAAAAGCAGAAGTTTAGAGTCACTGGACAAGTTGTCAATGCTCAATGCAGAGAAAGAAATTAAAGATATACCTGGCAATGATCAATGTGCCGACTGTGGGAAACAGGATCCTAAGTGGGCTAGCATTAATTTAGGTTTGGTATTATGCATAGAGTGTTCTGGCCTTCACAGGGGTTTAGGGGTTCATGTTTCGAAAGTAAGGTCACTTAATCTTGATGACTGGGAACCGGAATCAATTAAGGTAATGAAGGAACTTGGCAACCAGGTTGTGAATAGAATTTTGGAATCGAGGACAGATGCAGGAGCACATAAACCTTCTCCGGATAGTAAAAGGGAAATTAAAGAGGAATGGGtaaaagcaaaatatgtgGAAAGGAGATATTTTTGTTGGAGAAAATGTATCCAGAAAATCATTCCACTGGACGAACACATCCTTCGAGCTTTGGACAAAGTTCCTGGTCACCATGTTGGTGATGTAATACGACCAACCAAGAAGAAGTTAGGACGTAGGCGACCAAACTTGACCATTTTTAAGAGATTCAGTAAGAGTGAGAAAAAGAATTGCGAGTCATTAAAGGAAAAACCAAGAGATGAAAAGGCTGCGCACAGCTCGGCCACAACAAGCCCTGAACTATCGCCGGAGATCAGCCGAAGTGAACCACCTCTATTAAAGTCAAGGTCTCCACAAGAATCAAGTGATGAATCAGGAATTCCTTTCAAAGAAGATGGAAGTGAAACcggaaaagaaaaatttcctCCTTCACCAAGAAAGATCAATGAAAAAATTCTCAAAGCTCAACTTGTTGCAATAGATCGGAACTCCATTGGAAGTTGCTatgacaacattttgcaaaaagATGATGGCGATTCTGAAGCAAGTGTTGAAGAAACAGATATAGTTGAGGATTATCATGATTCAGATGATGAGCCCTGTGAGGAGGAACCTGTGAAAGAGAGTAAACCTGACGTCATAGAAGATTTGATACAGGGGGAGTCTGCAGAGTACCGAGCAAGagaaacattgaaaaatatcCCTGCAAATTTGTTAATGTACAAAGCAACAGATTGGAAGAACTTGCCACTGATGTTACTGGCTTTGACAGCAGGGGCAAAAGTAAACTGGCAAAATGATGAAGATGAGCTGAAAACAAGCTTGCATCAATCTGTGGAAGCAGGTTATCTGGCTGGTACAGAATTTCTTTTGCAAAATGGTGGTAAGATAAATCTTCGTGATTCTCGAGGCAGAGCAGCGTTGCACCATGCTGCTCTTCTTGGACAAACTGGGGAGGCATGTTTATTGCTGAAGAAAGGAGCAAACCAATATGCTATTGATGAAAATGGCCAGgaTCCATTGATGATTGCTCTGTCCCAAGTGCATGCTGATATAGTGACATTATTGAGGTTATCTCGGTTGAACGATGAAATGAAGGAATCCAGTGATAACACAGAAAAACTTGGAGATAACACATTCACAGATGTTGTTAgagatttttcaaatatagcaTCACTAAATCCTGAAAGGTTACAAAGGAAATATGATCCAGACAGACACACCAATGTTTAG

Transcript

ENSAPQT00000041348

CACCAAAATGACCAAAATGTTAACAGTCAATAACCATCTGTCAAGACATTAAGTGGTAGGCAATAACCATATGTGAAGACAATAATACTAAGTGGTACAAATAACCCTGTGTGGTTTTTCATTGAAGATTTCAGATTGAACAAAATGAACAAGATATCTTGAAACTAGAATCTGAACTTGAAAAGTGGCCTTCTCAAAGGTGTTGACTCATTGTGTATGTATTTCAATGGTGATGGTGTGGTCACAGAATCCTTGGGAAAATTTACCAATGTTTTAGAAGAAGCTTTGTCTTATTTCATGATACTTATGGATCAAACACAGTGTTCAATTGCCAATGCTCTTCAGAAATTCCTGAAAGAGGAAATTAAGAAAGTGAAAGAAACTAAAaagatttttgacaaaatggGTTATGACCTAAGCAATGCATTAGTGAGGAATTCACAGTTGCCAAAAAACAGTAAACCTACAGAGATTGAAGAGATGAAAAACATTGTGACAGCAACAAAAGTTGGTTTTGACCATTTGTCATTGGATTACACATTTCAAATCAATGTTTTGCAGTcaagaaaaagatttgaaattttagatgTGATGTTGGCATATATGCATGCACAGTACACATACTTTCATCAAGGGTTTAATTTGCTCAAAGAAATTGAACCACAGATGCGCTCTCTTGGAAAGCAGCTCGAGGAACTCTCTGTATCATTTGTGGCAGAAAAAAAAGAGATGGAAGGAAGGCATCAACTTGTGCAGGGAAGGGAAGATTCTTTGTTTGCAACAGTCGGTCCTGTTCCATCTTCCAATGACGTTATTCTAGAAGGATATTTATTCAAAAGAAGTAAGAATGCATTTAAAACGTGGCAAAGGAGATACTTCACGATACAAAATAACCAGTTATTTTACCAACACAAATTCAAGGATGGAAAAACTGTCCTTGCAGAAGACTTAAGACTGTGTAAGATCCGAGAATCAGAAGATATAGATAGAAGATCTTGTTTTGAACTGATATCTCCAACCAAGCTGGTCATCCTTCAAGCTGACTCGAGGGAGTTACAAAACATGTGGGAAAATGCCATGAAGGTCAGCATAGATCATGCATTTGGTTTGCCACATCTGGATGTAAATGATGAAGAGGATTCACAAATCTCAAACAACACATTTCTATCTATTCCTGTAACAAAAAGCAGAAGTTTAGAGTCACTGGACAAGTTGTCAATGCTCAATGCAGAGAAAGAAATTAAAGATATACCTGGCAATGATCAATGTGCCGACTGTGGGAAACAGGATCCTAAGTGGGCTAGCATTAATTTAGGTTTGGTATTATGCATAGAGTGTTCTGGCCTTCACAGGGGTTTAGGGGTTCATGTTTCGAAAGTAAGGTCACTTAATCTTGATGACTGGGAACCGGAATCAATTAAGGTAATGAAGGAACTTGGCAACCAGGTTGTGAATAGAATTTTGGAATCGAGGACAGATGCAGGAGCACATAAACCTTCTCCGGATAGTAAAAGGGAAATTAAAGAGGAATGGGtaaaagcaaaatatgtgGAAAGGAGATATTTTTGTTGGAGAAAATGTATCCAGAAAATCATTCCACTGGACGAACACATCCTTCGAGCTTTGGACAAAGTTCCTGGTCACCATGTTGGTGATGTAATACGACCAACCAAGAAGAAGTTAGGACGTAGGCGACCAAACTTGACCATTTTTAAGAGATTCAGTAAGAGTGAGAAAAAGAATTGCGAGTCATTAAAGGAAAAACCAAGAGATGAAAAGGCTGCGCACAGCTCGGCCACAACAAGCCCTGAACTATCGCCGGAGATCAGCCGAAGTGAACCACCTCTATTAAAGTCAAGGTCTCCACAAGAATCAAGTGATGAATCAGGAATTCCTTTCAAAGAAGATGGAAGTGAAACcggaaaagaaaaatttcctCCTTCACCAAGAAAGATCAATGAAAAAATTCTCAAAGCTCAACTTGTTGCAATAGATCGGAACTCCATTGGAAGTTGCTatgacaacattttgcaaaaagATGATGGCGATTCTGAAGCAAGTGTTGAAGAAACAGATATAGTTGAGGATTATCATGATTCAGATGATGAGCCCTGTGAGGAGGAACCTGTGAAAGAGAGTAAACCTGACGTCATAGAAGATTTGATACAGGGGGAGTCTGCAGAGTACCGAGCAAGagaaacattgaaaaatatcCCTGCAAATTTGTTAATGTACAAAGCAACAGATTGGAAGAACTTGCCACTGATGTTACTGGCTTTGACAGCAGGGGCAAAAGTAAACTGGCAAAATGATGAAGATGAGCTGAAAACAAGCTTGCATCAATCTGTGGAAGCAGGTTATCTGGCTGGTACAGAATTTCTTTTGCAAAATGGTGGTAAGATAAATCTTCGTGATTCTCGAGGCAGAGCAGCGTTGCACCATGCTGCTCTTCTTGGACAAACTGGGGAGGCATGTTTATTGCTGAAGAAAGGAGCAAACCAATATGCTATTGATGAAAATGGCCAGgaTCCATTGATGATTGCTCTGTCCCAAGTGCATGCTGATATAGTGACATTATTGAGGTTATCTCGGTTGAACGATGAAATGAAGGAATCCAGTGATAACACAGAAAAACTTGGAGATAACACATTCACAGATGTTGTTAgagatttttcaaatatagcaTCACTAAATCCTGAAAGGTTACAAAGGAAATATGATCCAGACAGACACACCAATGTTTAGAAAGTACGTAGTGTCAATTGCAGACTGTAAATATGTCATTTTTCTacacttgtatttttattgcaatgGTGAAATAGAGGATGTATTGTATATGCAGGCAGTTTACTTAATGGGAgattatattttgcaaatacTCTGTGGCTGAAAGTAAATGTTTGAGTTCATGACAATCAAAACTGACAGGGCATAAAAAATTTTCCACATTGGAATCAGTTTCATTTGAAATCCTAAAATGTGTAAATCTAGTTTTTATAAAGATGATCGAATTTAATATGTACATAAGTTTTGAAACAAAAGCAATAGAACTTATTCAAATAGAAATGTGTGgtcatattttgttttttactgtGGATATTTgcaaaagaaataaataaaaagcaaCTCAAATTCACAAAGTAATAACTAAGCGTTTTAATAAAACCTGCTGGATATTGGAGACAATGCTTGACTTTGCAGCTTAGTAGGATATTTGGTCATATATTCATAGATTATCAGGGCTGAAGTAGTTTTTTTCATGTGCTGGCAGGTTAGATTAATTTTTTGAcaagcataaaaatttctgtcTCACTTAACTTCATGTTGAAACTATTTATCCTCCTTCTTTACATCCACTACTTCTTTTGGTTTAGAAGATTTCCATTTTTCCTCCCAATGTTTCTTCCATTCCTCCCTTTTCTCTGGACTCTAGCATGTCAGGGTTGAATTTAAATAGAGTTTTAGAAAAATGTGTATAAAGAATTCATTACTACAGTAAAGTCTGTCC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5ZK62	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Gallus gallus OX=9031 GN=ACAP2 PE=2 SV=1
Q6ZQK5	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Mus musculus OX=10090 GN=Acap2 PE=1 SV=2
Q5FVC7	Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Acap2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003672 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16746 all species →	BAR_3	BAR domain of APPL family	Domain	Interproscan
PF01412 all species →	ArfGap	Putative GTPase activating protein for Arf	Domain	Interproscan
PF00169 all species →	PH	PH domain	Domain	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR027267 all species →	Homologous_superfamily	AH/BAR domain superfamily	Interproscan
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR038508 all species →	Homologous_superfamily	ArfGAP domain superfamily	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR004148 all species →	Domain	BAR domain	Interproscan
IPR001164 all species →	Domain	Arf GTPase activating protein	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR045258 all species →	Family	ArfGAP ACAP1/2/3-like	Interproscan
IPR037278 all species →	Homologous_superfamily	ARFGAP/RecO-like zinc finger	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23180 all species →	CENTAURIN/ARF	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12489	ACAP; Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.