Gene detail

Detailed information of ENSAPQP00000037065.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB4032305.1, metalloendopeptidase OMA1, mitochondrial-like, partial [Paramuricea clavata]
Species abbreviation LSARM · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000041558

CAGTCAGTGGCTATTTCATCCAGTATTATACCTACAGTCAGTGGCTAATGGCTATATGCATTCAGTTGACGCAATTTGGtgtatttgttttgattttttaaccGACACGCGGACGTGAAAGGACAAATAATAATTAGAATGTGCATTTCCGAATGAtttatggtatggtataaagTTGCTGGCCTAAAAGTCATCGTGAAAAGTTATGTTTAAATTTGCGGAACGAGTAACAAAGCGTGCGTGTTTTTACAGTAGTACATGGAGGACAAATTCGACTGCTTTGCTTTACACCCGGGAAGTAAAACCACAGAATGAAATCAAGCACTTTTACAGAAAGAATTGTAGTTCTCCGACACTTTTACCCAAGGGATTCAATGGATTAAAGAATTTTCCAATTGAAAGCGAAAGAACATTGTATTTAAAAAGCCAAGTTAgattaaattcattttttttgaACCCTAAGAACGGCTATATTTTATGCCGGAAATTTCACCTTAGCGAACCTCGCAAAGCAGCGCCTATTCTGCCTGTCATCGGAGCATTCTTAGCAAGGTTTTCTGGTCCAATTGCTCAGCTTCTAAAATTAATGGCAGTTGTTGCTGGAAGAACATTTCGTAAATGGTGGGCAAAACTTCCGGGTCATCAGAAAGaaagaatgaaaaaacatttgttttcaagaaaagAACTTATTCTAGGAATTCTCAGTATCTTTGCTGGTGGCTGGTTATTTCTTTATTACATACATCTTGAAGAGACACCATACACTAAGAGGTCCCGTTATGTTGGTGTCAACCCCAAACAGATTCGAGAAATTGCAGAGAGTCAGTGGAGGCAATTACTAGAAAATTATGCAGACAATATTGTACCAGTGACACACCCTGACCACAAGCGAGTATTTCAAATCACGAAGAGGTTGATTATGGCAAATACAGATGAAATGATTGACCATTTGGACTGGGAAGTCAATGTGGTTTTATCCAATGAAATAAATGCATTTGTGTTACCTAATGgacaaatttttgtattcacTGGGCTGCTAAGGTTTCTAACTGATGACAATTCTCTGTCAATTATTCTGGGGCACGAAATTGCACATGCAATACTGCAGCATTCAGCAGAGCAGTTGTGTTTCAATGGATTTGTGAACTTAATTAAAGTTGTATTGCTGGCAACAATATGGGCACTTATCCCAAATGATTTTCTGGCATTTTTGACACAGTCTATCCAAAATGCCATTCTTGGGCTGTTCTGGCATTTGCCCTACTCTCGGACATTGGAAGAAGAAGCCGACAGAGTTGGTCTCTATTTTGCTGCTAAgGCATGTTTTGATGTTCGAGAAGGTCCGAAAGTCTGGCAAAAATTTGCCGCATTTGAAAAACTGCAAGACATTCCGAGTATGGAGTGGTTATCAACCCATCCCTCGCACGAGAATCGAGAACGCAACCTAGAAACCATCGTCCCAGAGGCATTGGCTTTACGAAAAAAGTGCCAGTGTCCAGACTTAACAGGTTTTTCAAGCGCTGCCCTAGAGAAAGTGAAACCCTTAACGATCTCGTCGTTAGCCGGAGTCTACAACCGTTCGCGCTGAAGAACAAAGATGCATTCTTCATGCTACTAAATATGAACAAACATTGTGTTGTATTCTATGTCTAAAATTATAAGACTTATAATGTAATTAgtaatacaaaatacaacttTCTTATATTATTTATGGTGTCTTTGCAAGCTAAGGTTGGTCTAGAGGGTGATATAATCATATAAATGATACACTAATAGTTAAtggaaaagaaaagacaattaGACAAAGTAAACTTTTCGCCCAGAGAATGCCGGTATATGCTTCCCGCTAACCCGCGAACAGGTATGCGCCGGGAACGAGATTGCCAAGGTTTCAGTTCACTAACCATCGTGTTATAATACGGATGATTATTAGGATACAATACACACATCACCATTTCCTCAATAATCCAAATAAGAGGGCACATAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
E9QBI7	Metalloendopeptidase OMA1, mitochondrial OS=Danio rerio OX=7955 GN=oma1 PE=3 SV=1
D3ZS74	Metalloendopeptidase OMA1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oma1 PE=1 SV=1
Q3SZN3	Metalloendopeptidase OMA1, mitochondrial OS=Bos taurus OX=9913 GN=OMA1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002755 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01435 all species →	Peptidase_M48	Peptidase family M48	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051156 all species →	Family	Mitochondrial and Outer Membrane Metalloprotease	Interproscan
IPR001915 all species →	Domain	Peptidase M48	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22726 all species →	METALLOENDOPEPTIDASE OMA1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004222 all species →	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0005743 all species →	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0006515 all species →	Biological Process	protein quality control for misfolded or incompletely synthesized proteins	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0034982 all species →	Biological Process	mitochondrial protein processing	Interproscan
GO:0051603 all species →	Biological Process	proteolysis involved in protein catabolic process	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23010	OMA1; metalloendopeptidase OMA1, mitochondrial	EC:3.4.24.-	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.