Genomic Location: not available for this species
NR annotation: CAB3979959.1, short-chain collagen C4-like isoform X1 [Paramuricea clavata]
Species abbreviation LSARM · all data for this species · gene families
| CDS |
| ENSAPQT00000041969 |
| Transcript |
| ENSAPQT00000041969 |
| Protein |
| ENSAPQP00000037424.1 |
| UniProt accession | Description |
|---|---|
| Q7XA42 | Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=RGA1 PE=2 SV=2 |
| O64790 | Probable disease resistance protein At1g61300 OS=Arabidopsis thaliana OX=3702 GN=At1g61300 PE=2 SV=2 |
| O82484 | Putative disease resistance protein At4g10780 OS=Arabidopsis thaliana OX=3702 GN=At4g10780 PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0010175 (this species only) |
| Ubiquitin family | E3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00931 all species → | NB-ARC | NB-ARC domain | Domain | Interproscan |
| PF17908 all species → | APAF1_C | APAF-1 helical domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR044974 all species → | Family | Disease resistance protein, plants | Interproscan |
| IPR002182 all species → | Domain | NB-ARC | Interproscan |
| IPR041452 all species → | Domain | APAF-1 helical domain | Interproscan |
| IPR001680 all species → | Repeat | WD40 repeat | Interproscan |
| IPR036322 all species → | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR019775 all species → | Conserved_site | WD40 repeat, conserved site | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR015943 all species → | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR042197 all species → | Homologous_superfamily | Apoptotic protease-activating factors, helical domain | Interproscan |
| IPR036388 all species → | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23155 all species → | DISEASE RESISTANCE PROTEIN RP | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0006952 all species → | Biological Process | defense response | Interproscan |
| GO:0098542 all species → | Biological Process | defense response to other organism | Interproscan |
| GO:0043531 all species → | Molecular Function | ADP binding | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
ENSAPQP00000037424.1.
