Gene detail

Detailed information of ENSAPQP00000038104.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: XP_028394623.1, uncharacterized protein LOC114518825 isoform X1 [Dendronephthya gigantea]
Species abbreviation LSARM · all data for this species · gene families

Sequence

CDS

ENSAPQT00000042762

ATGGATCCGAACGAGACAAACTTTCCTCGCCTTTCTTCGCCAACCGCTGAGATAAAAcctcattatgacgtagtcgTCGTGGGCTCAGGTTACGGTGGCTCCATCGCGGCGTGTCGGGCTGCAAGCGCGGGAAAATCCGTGTGCTTATTGGAGAAAGGAATGGAGTGGTTACCTGGCGAATTTGCCGAGACGCTAATTCACGCGGAACGCCACATGCACATGCATTTTGGTGGCAAAGAAACTCACACGGGTAAACCGTACGGCTTATATGAAGTATACTGGGGCGATCAGGTCAGTGTCTTGCAGGGTTGCGGGCTCGGAGGCGGATCCCTCATCAATGCCAACGTTGGTCTCGATGCTGAGCCCGCGGTGTACCAAAAATCTGCCTGGCCAGCGGCATTTATGAGCGACGTGAAAAATTTGCTGGAAACGGATCGGAAACACGTGACCGACATGCTCATGCCCACGCCATACCCAGACTCCTACCCTCCATTGGCTAAGATCGAACGCATGCGCGAGGGATTCGCTGCTTTCGACATAGAAGATTTGcataaacatttttataaGACGCCGATATATGTGACGTTCGAGGATAAGGAGAAGAACCATGTTGGGGTGCCCCAACCAAAATGCACGGGCTGTGGGAATTGCTGTGGTGGCTGTAATGTTGGCGCGAAAAACACTTTGAACATGAATTACATAGCGGAAGCCAAGGCTTATGGAGCCGAGATTTATACCAAGGTCGAAGTGATGTCAATCGCGCGAGAGTCCAACTCCAACGCTTGGTTAGTCTGCTACAAGCGTCTCGTCAAAGGCCATTTCGAAGTCGAAGAGGAAACGATCCACGCAGATCACGTGATCCTTGGCGCAGGCGCGTTAGGTTCTACGAAAATCTTACTTCGCTCGCGAGAACGAGGTCTAAACGTTTCCCCTACCATCGGCACACGTTTTTCCACGAACGGGGACATGCCCGCATTCAGCTACGACGGCGACAAGGAAACGAATTCCATTGGTGTTAAAACGAAGCATTTGATTGGTGCGCATAAGAAAGTCGCCCCAGGTCCCTGTATCACGACCGTGATCGATATGAGAAAGGAGGGCAGGGAACTGGTGGATAATTTTGTCATTGAAGATGGAACCCCGCCGTcgtctttgaaagaaatttataGTGTTGGGCTAACTattgctggaaagAAAGGATTGGTTAACGCCCACAAAGCTATGGACAAATCTTTAGCGTTTCTCTGCATGAGCCACGACAAGGCCAGCGGTAAAATAACCTTCCACGCTGAAACAGACGACATCAGTGTGAGCTATGAAGACGTTGGTTACGAACCGAATTTCAAAGTCGTCGACGACGGAACCAGAAAGGTGACAGAAAAACTAGGAGGAACATTTGTAAGCAATCCATTATGGACTGAACACCTCGGGAAAAGTGTCATTACTGTGCATCCATTAGGTGGGTGCCCTATGGCCGAATCCGGTCAAGCCGGTGTTGTCAATCATGCTGGACAGGTTTTTGAGGGTGACTCAAATGAAGTATTAGAAGGTCTTTATGTCGTGGACGGTGCTATCATTCCTACCTCTGTCGGTGTCAACCCAACCCTCACCATCTCATGTGTGGCTGAACGTTGCATGCGCTTGCTCGCTGAGAGGGAAGGATGGCGTATTAACTATGCGTTTAAACATCTTGGTGAAAACGCATTCGATGAACGCAGGCCAGGAATTATCTTCACCGAGAAGATGGTCGGAACATTCAGCTTTTGCGAAAGTCGAGACGAAGAGGGAAATACGACAGGGAAACGTGAGGAGACTCCGTGTGAGTTCACCTTGACCATCGAGTCCACTGATTTGAAATCCATGTTGGAATTTGATCCAGATCATGATGCCGACATCAGTGGAACGGTCACGTGTCCTGCTCTTTCATCTGCGCCAATGAAAGTTTCCGAAGGTCGTTTTCAACTGTTTAGCCCAGCAGAAAGCGACGACCCCGACAACCCTTCGAAAGAAATGGTCTACAAAATGGTGCTGAGCGACGAAAATAGGTCCACATTCTCCTTCCATGGCGTCAAGCATGTTCATAAGGATCATTTCTGGGAAATTGGTCTACGAGACACCACCGTCCTTTTTGTAAACATATACAAGGGAGCGAGCTTCTCTGGCGAAGTTCATGGCACAGCGGAATTGAAAATAACCGTTCCAAACTTTGCAAAGCAGCTGGCGTCCATGGAAATAACTCACACGAAGAATATTCGCGAGAAAACCTATTGGCTGGCAAGGTTTGGAGGATTTTTTGGCAAGACATTGTGGAATGTTTATGGGCCTGGCGTTTGGGCTCACAACGCGAATGTTGACGAGGAAGACATGGTGCCCAGACAGAGACGAGcgctgaaattgaaaggatGTGTCCCTGTTATTCACGATTGTGTGACAGAGGACGAGTTCCAGATTCTCCTCACTCGCTACGAAGGAGGGCAGAAGGGTCCGGTTGTCATGTTTCATGGCGCTGGTGTGAGCAGCGAGATATTTTCGTTGGATAGCATCGATACAAATCTTGTCGAATATCTGGTGCTACAGGGGTATGACGTGTGGCTTGTCGATTGGCGTACTTCGTGCGATCTTCCCTTAATGGTTGAAAGAAAATATACACTGGACGACTGTGCAAAATATGACTATCCAGCGGCTATCGATAAAGTACTGGAAATTACCGCAAAGaGAACCGTACAAGTGGTCGCCCATTGCGCAGGCTCTCTCGTCCTTTTCGCCTCCCTTTTATCTGGCGTCCTCGATGGTAAAGTTCGCAGCGTTGTCGCGAGTCAGGTCGCTGCCCATCCCATCCCCGCGCCCTTCAACTCCTACAAGTCCAGCCTGCGACTGCCCGACGTTGCCCACGCCTTCGGGGTTCGTGGTTTGACCGTTGACACCGGCAAGAATTCGTCATTCTTTGGTCGAATTTTTAACGGTTTCTCTCGGGCCGTTGTCAACCACCTTGTCCTCGATCGCAACGAACGTTGTCAGAGTCCTGTTTGTTCCAGGATCACGTTCATCTATGGCTTGTTATACCAGCACGGCAATCTCACCGATCTCACCCACAGTACTTTGCACGAGTTCTTCGGTCACGTGACATCGTTGGTCAGCGCTCAGCTTGCGCTCACGATGCGACGAAAGAAAGTGGTGTCGGCCAGCGGCGAAGATATTTATTTGCCAGACAGTGACCAGGGATTGAATTCACCTGTTTATAAAGAGCACATCAACCGTCTCAATATGCCAATACGCTTCATTGTTGGTGAACAAAACAGTTGCTACTTACCGCAGGGTGTGCAGACCACGTTGGAGGCTCTCAAAGAAGCCCATCCTCAACAAAACTATTCCTGTTTTGTGATTCCTGATTACGGCCATCTCGACTGCATTTATGGAAAAAATGCCGCGCTCGACGTATTCCCGCACATACTAGAATCCCTGGAACAATATGCTCACGCCTAG

Transcript

ENSAPQT00000042762

GTTGACAAGTAGCTGAAAGCCATAAACAGGGTTGAAAAACTTCCCTTTGTCAGTTGTGAAGGACGTATTGAAGCCGAATTGTTTTGAAGAATTCAGCATCAAATTTGCTTTCTGTTCGATAAAGTTACAGATGGATCCGAACGAGACAAACTTTCCTCGCCTTTCTTCGCCAACCGCTGAGATAAAAcctcattatgacgtagtcgTCGTGGGCTCAGGTTACGGTGGCTCCATCGCGGCGTGTCGGGCTGCAAGCGCGGGAAAATCCGTGTGCTTATTGGAGAAAGGAATGGAGTGGTTACCTGGCGAATTTGCCGAGACGCTAATTCACGCGGAACGCCACATGCACATGCATTTTGGTGGCAAAGAAACTCACACGGGTAAACCGTACGGCTTATATGAAGTATACTGGGGCGATCAGGTCAGTGTCTTGCAGGGTTGCGGGCTCGGAGGCGGATCCCTCATCAATGCCAACGTTGGTCTCGATGCTGAGCCCGCGGTGTACCAAAAATCTGCCTGGCCAGCGGCATTTATGAGCGACGTGAAAAATTTGCTGGAAACGGATCGGAAACACGTGACCGACATGCTCATGCCCACGCCATACCCAGACTCCTACCCTCCATTGGCTAAGATCGAACGCATGCGCGAGGGATTCGCTGCTTTCGACATAGAAGATTTGcataaacatttttataaGACGCCGATATATGTGACGTTCGAGGATAAGGAGAAGAACCATGTTGGGGTGCCCCAACCAAAATGCACGGGCTGTGGGAATTGCTGTGGTGGCTGTAATGTTGGCGCGAAAAACACTTTGAACATGAATTACATAGCGGAAGCCAAGGCTTATGGAGCCGAGATTTATACCAAGGTCGAAGTGATGTCAATCGCGCGAGAGTCCAACTCCAACGCTTGGTTAGTCTGCTACAAGCGTCTCGTCAAAGGCCATTTCGAAGTCGAAGAGGAAACGATCCACGCAGATCACGTGATCCTTGGCGCAGGCGCGTTAGGTTCTACGAAAATCTTACTTCGCTCGCGAGAACGAGGTCTAAACGTTTCCCCTACCATCGGCACACGTTTTTCCACGAACGGGGACATGCCCGCATTCAGCTACGACGGCGACAAGGAAACGAATTCCATTGGTGTTAAAACGAAGCATTTGATTGGTGCGCATAAGAAAGTCGCCCCAGGTCCCTGTATCACGACCGTGATCGATATGAGAAAGGAGGGCAGGGAACTGGTGGATAATTTTGTCATTGAAGATGGAACCCCGCCGTcgtctttgaaagaaatttataGTGTTGGGCTAACTattgctggaaagAAAGGATTGGTTAACGCCCACAAAGCTATGGACAAATCTTTAGCGTTTCTCTGCATGAGCCACGACAAGGCCAGCGGTAAAATAACCTTCCACGCTGAAACAGACGACATCAGTGTGAGCTATGAAGACGTTGGTTACGAACCGAATTTCAAAGTCGTCGACGACGGAACCAGAAAGGTGACAGAAAAACTAGGAGGAACATTTGTAAGCAATCCATTATGGACTGAACACCTCGGGAAAAGTGTCATTACTGTGCATCCATTAGGTGGGTGCCCTATGGCCGAATCCGGTCAAGCCGGTGTTGTCAATCATGCTGGACAGGTTTTTGAGGGTGACTCAAATGAAGTATTAGAAGGTCTTTATGTCGTGGACGGTGCTATCATTCCTACCTCTGTCGGTGTCAACCCAACCCTCACCATCTCATGTGTGGCTGAACGTTGCATGCGCTTGCTCGCTGAGAGGGAAGGATGGCGTATTAACTATGCGTTTAAACATCTTGGTGAAAACGCATTCGATGAACGCAGGCCAGGAATTATCTTCACCGAGAAGATGGTCGGAACATTCAGCTTTTGCGAAAGTCGAGACGAAGAGGGAAATACGACAGGGAAACGTGAGGAGACTCCGTGTGAGTTCACCTTGACCATCGAGTCCACTGATTTGAAATCCATGTTGGAATTTGATCCAGATCATGATGCCGACATCAGTGGAACGGTCACGTGTCCTGCTCTTTCATCTGCGCCAATGAAAGTTTCCGAAGGTCGTTTTCAACTGTTTAGCCCAGCAGAAAGCGACGACCCCGACAACCCTTCGAAAGAAATGGTCTACAAAATGGTGCTGAGCGACGAAAATAGGTCCACATTCTCCTTCCATGGCGTCAAGCATGTTCATAAGGATCATTTCTGGGAAATTGGTCTACGAGACACCACCGTCCTTTTTGTAAACATATACAAGGGAGCGAGCTTCTCTGGCGAAGTTCATGGCACAGCGGAATTGAAAATAACCGTTCCAAACTTTGCAAAGCAGCTGGCGTCCATGGAAATAACTCACACGAAGAATATTCGCGAGAAAACCTATTGGCTGGCAAGGTTTGGAGGATTTTTTGGCAAGACATTGTGGAATGTTTATGGGCCTGGCGTTTGGGCTCACAACGCGAATGTTGACGAGGAAGACATGGTGCCCAGACAGAGACGAGcgctgaaattgaaaggatGTGTCCCTGTTATTCACGATTGTGTGACAGAGGACGAGTTCCAGATTCTCCTCACTCGCTACGAAGGAGGGCAGAAGGGTCCGGTTGTCATGTTTCATGGCGCTGGTGTGAGCAGCGAGATATTTTCGTTGGATAGCATCGATACAAATCTTGTCGAATATCTGGTGCTACAGGGGTATGACGTGTGGCTTGTCGATTGGCGTACTTCGTGCGATCTTCCCTTAATGGTTGAAAGAAAATATACACTGGACGACTGTGCAAAATATGACTATCCAGCGGCTATCGATAAAGTACTGGAAATTACCGCAAAGaGAACCGTACAAGTGGTCGCCCATTGCGCAGGCTCTCTCGTCCTTTTCGCCTCCCTTTTATCTGGCGTCCTCGATGGTAAAGTTCGCAGCGTTGTCGCGAGTCAGGTCGCTGCCCATCCCATCCCCGCGCCCTTCAACTCCTACAAGTCCAGCCTGCGACTGCCCGACGTTGCCCACGCCTTCGGGGTTCGTGGTTTGACCGTTGACACCGGCAAGAATTCGTCATTCTTTGGTCGAATTTTTAACGGTTTCTCTCGGGCCGTTGTCAACCACCTTGTCCTCGATCGCAACGAACGTTGTCAGAGTCCTGTTTGTTCCAGGATCACGTTCATCTATGGCTTGTTATACCAGCACGGCAATCTCACCGATCTCACCCACAGTACTTTGCACGAGTTCTTCGGTCACGTGACATCGTTGGTCAGCGCTCAGCTTGCGCTCACGATGCGACGAAAGAAAGTGGTGTCGGCCAGCGGCGAAGATATTTATTTGCCAGACAGTGACCAGGGATTGAATTCACCTGTTTATAAAGAGCACATCAACCGTCTCAATATGCCAATACGCTTCATTGTTGGTGAACAAAACAGTTGCTACTTACCGCAGGGTGTGCAGACCACGTTGGAGGCTCTCAAAGAAGCCCATCCTCAACAAAACTATTCCTGTTTTGTGATTCCTGATTACGGCCATCTCGACTGCATTTATGGAAAAAATGCCGCGCTCGACGTATTCCCGCACATACTAGAATCCCTGGAACAATATGCTCACGCCTAGCCAATGACATACACTACGAATACTTGCTCACGTGATCGTCATCACACCTGAACTGACGTCCTCAtcacgtgaaaaaaagttaag

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A0A4D6G3C8	Cholesterol oxidase OS=Acinetobacter baumannii OX=470 GN=choxAB PE=1 SV=1
P9WMV8	Cholesterol oxidase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=choD PE=3 SV=1
P9WMV9	Cholesterol oxidase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=choD PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001043 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00732 all species →	GMC_oxred_N	GMC oxidoreductase	Domain	Interproscan
PF00890 all species →	FAD_binding_2	FAD binding domain	Family	Interproscan
PF05199 all species →	GMC_oxred_C	GMC oxidoreductase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR000172 all species →	Domain	Glucose-methanol-choline oxidoreductase, N-terminal	Interproscan
IPR036188 all species →	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR052542 all species →	Family	Cholesterol Oxidase Enzyme	Interproscan
IPR003953 all species →	Domain	FAD-dependent oxidoreductase 2, FAD binding domain	Interproscan
IPR007867 all species →	Domain	Glucose-methanol-choline oxidoreductase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47470 all species →	CHOLESTEROL OXIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016614 all species →	Molecular Function	oxidoreductase activity, acting on CH-OH group of donors	Interproscan
GO:0050660 all species →	Molecular Function	flavin adenine dinucleotide binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03333	choD; cholesterol oxidase	EC:1.1.3.6	Steroid degradation	ko00984	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.