Gene detail

Detailed information of ENSAPQP00000038875.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB4011438.1, cell division cycle 23 homolog [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

ENSAPQT00000043702

ATGACAGATGGCACATGTCTGGACAGGTTTGTAGGCAAAATTACCATGGATGTTGTAAGGACTGCAATTGAAAAGGTGTCGTATATGGTGGTTGAAACAGATGATGAAGATTCCCTCTTGGAACAATTGAACGATGAGTCGTTTAAAGATTCTGTAATTATAGAAACTAGTGTTGAGCAATTTTCTGACCTGCCAGAAATTAAACCCGAGGACATATCAAACGCTTACGTCCGTGAAAGATGCTGTACACTTGTGGAAGATATCTTTACCGAAGTTTATGATAAATTGCAAAGGATATTTGACACAAATGGCCAGAATATGTCAAATGATATTGAATCTTCAGGAAAGAAACTTAAGTTACTCGATTGCATAAAAGATTCTGATCGCTTGCAGGTGTACTTTCAAGAATTATCCACCAGTATTGTTCAAAATGCATTTGATAAGATAATTGAAGCAAGTAAACACTCGGAGCATGTGCCTTATTTGGCTTCTGATAAAGAAAGCGATATTGAAATTAGCATTGATACTCAAGAAGGAAGTGAGTtgaatattgagaaaaaatttgACAATATTGACAAAACTAACACTTCTGAAATTGATTCTGAACATCAAAACGGTTTTCAGAATGAGAATCTGTCTGTGATACAAGAACCAAGATCCCCAGTTGATTCTGTTCTTCACGATGAAGATTCCATTATAGAATCAGGGCAAACTAAAGGTGGCAGCACACTGGAAAGTACTGCTTATTTCACAATGTATCAAACTGCAGGAGATGAAAGTAACAACGGACAATCCACCATTAAGGACAGTTTTTTTAGTGCAAAGGATGAAACACAAGCTGAACAGACAGCTGTTGATTCAACAATGTTTACAACAGCTgatgatttgaaagaaaattcaagTGTATTTCTCAGTTTTGAGAAAGATTTATCACAAGATGCTACAGTTATGCAAAGTACTCCGGGTGGCATTGACAAAAGTAGGTTTGATATTGATACAACTTTGACATCTGGCCCACGTCAAAGCACACCACTTATCGATGATAAGTCTTACAACCATGAGATAACTTTGACTTCTGAACAATATGGAGGCATGAATGACACCAGTCCGCATCAGAGCACACCATCTAAAATCGATGAAACCGCAGAAGACTCAGATATCCTTCCTGGGGACTTGAAACATCACGTGGCAGAGTATGAGAGAACAATACAGGAATTGTCAGGGGATGAGTCATCATTTGGTGAGCCGTCCACTCCTAGGACATTGTCTCGACAATCTAGTGCATTTGGAAATGTGACACTAgagtttgatactgattgggAAGCCAGCATGAAAGGAATGGAGGAGAAGGGCAAACCTGAAGAGAAACACAAGGTCATCTTGCATGAGTTATCATTTGAAGACCACCACCGTCTGAAAGCTCCAGAGTTATTATGTCCCGTGTTTTTGGCTGTAcaagatgatgaatttgacgacgaagaaagaaagcaaaagaTACGAATGTCTCAGAGTATTGATGATCTTTGTGAAATGATATCAGAAGATAGTGATGACGATAGAGATCTTTCTCTGAGGAGACGAGCATTGTCATTTGATTCTAAGAAACCTTCCTCTAAAGAACCGCGGAAAAAGGCCCCAACAAGGGAGGAACTGATGGCAGCATTTGAAGAACTACAGAATGAGATCATGGAAGAAAAAGACATGGAAGATGCAGAAGAAGAAGTGAATGAGGAGGGTGAGGAGGAGAAGGGAACGCCTGGAGAAGAAGTAATGAATAATGAGGAACCGGAGGGAAGTGGATTGGATGATCCATTAAGGTGGCACACTGTTGTTTTCAACGGACAACACAAAGTGATTGATTTGAAATTGCTGGAACCTTTCCTTAAGGTTCTCACACATGGAGGCTATCATCATGAGGGGGAGAAGAAAACTGTGATCGTGGTTCTGACTGCGTGTAATTTACCcaacaagaaaatgaaaagataCTCGTTTTTAATGGAACAACTTTTCTTCTTCATAATCAGTACCATGGATTTGCTAGTCACATCGGAGGAATACATCTTTGTGTATTTCCACGGAGGAACAAGCAAGAATCAGTCGCCCAGCTTCTCATGGTTAAAGAAatattatcaatatattgatcatAGATTACGAAAGAGTGTCACTAAAGTGTACGTGGTTCATCCTAATCTCTGGCTTAAAAGTGTCTTTCGGCTTTGTCGTCCATTTCTAAGCTCTAATTTTGCAAGAAAGTTGAAGTTTGTGAATACTTTGAAAGAATTGTCAAGTCACATTAAGAcggattttatttttattcctgATGAGGTTGTTAGAGTTGATCCTGATTATCGGAAGCTCCATACATAG

Transcript

ENSAPQT00000043702

gCCGTTAtgtccaaattttcccgcctcacttgtgattggttgaaaatcccaggtttagccaatcagaaatcAATTTTGTGACTTGTATAaacgggacgaaacggtaggggacgaaacggttgCGGGACGAAACGACCAGATACCGAAGACACGAGCGACAAGATCGGGAGGTTTTCAGGTCAAGCGTGACAAATTAATAAGGGGAAATTTGACAATCGATTGTCACTCATTTCTGCTACATAAAAGGAAATTATTCTGTGAGCATCAAAACATATAAATCAGGGACAGTCAGCAGCAAGATGACAGATGGCACATGTCTGGACAGGTTTGTAGGCAAAATTACCATGGATGTTGTAAGGACTGCAATTGAAAAGGTGTCGTATATGGTGGTTGAAACAGATGATGAAGATTCCCTCTTGGAACAATTGAACGATGAGTCGTTTAAAGATTCTGTAATTATAGAAACTAGTGTTGAGCAATTTTCTGACCTGCCAGAAATTAAACCCGAGGACATATCAAACGCTTACGTCCGTGAAAGATGCTGTACACTTGTGGAAGATATCTTTACCGAAGTTTATGATAAATTGCAAAGGATATTTGACACAAATGGCCAGAATATGTCAAATGATATTGAATCTTCAGGAAAGAAACTTAAGTTACTCGATTGCATAAAAGATTCTGATCGCTTGCAGGTGTACTTTCAAGAATTATCCACCAGTATTGTTCAAAATGCATTTGATAAGATAATTGAAGCAAGTAAACACTCGGAGCATGTGCCTTATTTGGCTTCTGATAAAGAAAGCGATATTGAAATTAGCATTGATACTCAAGAAGGAAGTGAGTtgaatattgagaaaaaatttgACAATATTGACAAAACTAACACTTCTGAAATTGATTCTGAACATCAAAACGGTTTTCAGAATGAGAATCTGTCTGTGATACAAGAACCAAGATCCCCAGTTGATTCTGTTCTTCACGATGAAGATTCCATTATAGAATCAGGGCAAACTAAAGGTGGCAGCACACTGGAAAGTACTGCTTATTTCACAATGTATCAAACTGCAGGAGATGAAAGTAACAACGGACAATCCACCATTAAGGACAGTTTTTTTAGTGCAAAGGATGAAACACAAGCTGAACAGACAGCTGTTGATTCAACAATGTTTACAACAGCTgatgatttgaaagaaaattcaagTGTATTTCTCAGTTTTGAGAAAGATTTATCACAAGATGCTACAGTTATGCAAAGTACTCCGGGTGGCATTGACAAAAGTAGGTTTGATATTGATACAACTTTGACATCTGGCCCACGTCAAAGCACACCACTTATCGATGATAAGTCTTACAACCATGAGATAACTTTGACTTCTGAACAATATGGAGGCATGAATGACACCAGTCCGCATCAGAGCACACCATCTAAAATCGATGAAACCGCAGAAGACTCAGATATCCTTCCTGGGGACTTGAAACATCACGTGGCAGAGTATGAGAGAACAATACAGGAATTGTCAGGGGATGAGTCATCATTTGGTGAGCCGTCCACTCCTAGGACATTGTCTCGACAATCTAGTGCATTTGGAAATGTGACACTAgagtttgatactgattgggAAGCCAGCATGAAAGGAATGGAGGAGAAGGGCAAACCTGAAGAGAAACACAAGGTCATCTTGCATGAGTTATCATTTGAAGACCACCACCGTCTGAAAGCTCCAGAGTTATTATGTCCCGTGTTTTTGGCTGTAcaagatgatgaatttgacgacgaagaaagaaagcaaaagaTACGAATGTCTCAGAGTATTGATGATCTTTGTGAAATGATATCAGAAGATAGTGATGACGATAGAGATCTTTCTCTGAGGAGACGAGCATTGTCATTTGATTCTAAGAAACCTTCCTCTAAAGAACCGCGGAAAAAGGCCCCAACAAGGGAGGAACTGATGGCAGCATTTGAAGAACTACAGAATGAGATCATGGAAGAAAAAGACATGGAAGATGCAGAAGAAGAAGTGAATGAGGAGGGTGAGGAGGAGAAGGGAACGCCTGGAGAAGAAGTAATGAATAATGAGGAACCGGAGGGAAGTGGATTGGATGATCCATTAAGGTGGCACACTGTTGTTTTCAACGGACAACACAAAGTGATTGATTTGAAATTGCTGGAACCTTTCCTTAAGGTTCTCACACATGGAGGCTATCATCATGAGGGGGAGAAGAAAACTGTGATCGTGGTTCTGACTGCGTGTAATTTACCcaacaagaaaatgaaaagataCTCGTTTTTAATGGAACAACTTTTCTTCTTCATAATCAGTACCATGGATTTGCTAGTCACATCGGAGGAATACATCTTTGTGTATTTCCACGGAGGAACAAGCAAGAATCAGTCGCCCAGCTTCTCATGGTTAAAGAAatattatcaatatattgatcatAGATTACGAAAGAGTGTCACTAAAGTGTACGTGGTTCATCCTAATCTCTGGCTTAAAAGTGTCTTTCGGCTTTGTCGTCCATTTCTAAGCTCTAATTTTGCAAGAAAGTTGAAGTTTGTGAATACTTTGAAAGAATTGTCAAGTCACATTAAGAcggattttatttttattcctgATGAGGTTGTTAGAGTTGATCCTGATTATCGGAAGCTCCATACATAGTTAGACAAGATTATAGTCAATAAATTGTAATTTCCAACTTCGTTTGTATACCGAGAACTAATTCCTGTAAATTTTGACCGCTTGTCAGATCCGCCGTCTTCAATATATTGTCGAATCCTGTCCTTTATTATTGAAGTAAGTTCGCGTGCATGGCTTCTAAGTTCATAtcaaacaattaacaaatattatgagaaatttatatatgtaatataatataccaatttttattcattactgcacgatttttaaattattaataaaggTGTTATAAAGTTATATACATTCATTACTGAGCGTCCTACATTgtcgatattttttaatttaacagCGGTCAATTATGATTATCATATTATTACTGATATTCGCCCTTCGTTATTACATGGCTCTCCATGTAATTTTCTCATACATTAAAACTAACtgtttatatattaaaaagttTTCGTCATTAATTATAGaaagtaaaatttattaaacattGCTGCCGCTTTAATTCACAGTAAAACACAATCTCCAGCTATTTTAGTTTTCagtagaaatatttttttctggtTGATATctaatatataaatgatacAGTGTACTAATTATTGCTGAACAaaggctaaatattacaacaaACCGAACATGAATGAAACACGATCGCCAGAATACAACTCCTTTCCTATCATAAACTGTGAATTATTTGGCGAAAAATTTACGGCTGTACTTCGCCAAACAAGTCCTGGATATTTGGCTAACAACATTTTGGGCATAATCGTCaacatgattttgaattttcttacCATCGTGTTAAATTCTATTACTATTCTGACTATCTGGAGATCAAAGAAACTTAGAGGGACAGTGTGTTTCTTCTTGATAATGTTACAGTCAGTTGCGGACTTGTTTGTGGGTTTGCTTGCGATACCAGTAACCACTTACATCTACATCACTGGAATATCGTCTGCTCCTAGTGGCTGTCTTGTAATCGCTATTCAAGTGAAATCAGTGTATGTTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q0IHU9	Protein prune homolog 2 OS=Xenopus tropicalis OX=8364 GN=Prune2 PE=2 SV=1
Q5R4Q8	Protein prune homolog 2 OS=Pongo abelii OX=9601 GN=PRUNE2 PE=2 SV=1
Q5BJR4	Protein prune homolog 2 OS=Rattus norvegicus OX=10116 GN=Prune2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006456 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13716 all species →	CRAL_TRIO_2	Divergent CRAL/TRIO domain	Domain	Interproscan
PF12496 all species →	BNIP2	Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001251 all species →	Domain	CRAL-TRIO lipid binding domain	Interproscan
IPR036865 all species →	Homologous_superfamily	CRAL-TRIO lipid binding domain superfamily	Interproscan
IPR022181 all species →	Family	Bcl2-/adenovirus E1B 19kDa-interacting protein 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12112 all species →	BNIP - RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18449	PRUNE2, BMCC1; prune homolog 2	-	Signaling proteins	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.