Gene detail

Detailed information of ENSAPQP00000039086.1 in Leptogorgia sarmentosa

Genomic Location: chr9:1451076...1452786
NR annotation: CAB4019741.1, lin-52 homolog [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5NVP8	Protein lin-52 homolog OS=Pongo abelii OX=9601 GN=LIN52 PE=3 SV=1
Q5ZJQ3	Protein lin-52 homolog OS=Gallus gallus OX=9031 GN=LIN52 PE=1 SV=1
Q52LA3	Protein lin-52 homolog OS=Homo sapiens OX=9606 GN=LIN52 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008898 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10044 all species →	LIN52	Retinal tissue protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018737 all species →	Family	Protein LIN52	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31489 all species →	LIN52 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0070176 all species →	Cellular Component	DRM complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21775	LIN52; protein lin-52	-	Cellular senescence	ko04218	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.