Genomic Location: not available for this species
NR annotation: CAB4009536.1, WD repeat [Paramuricea clavata]
Species abbreviation LSARM · all data for this species · gene families
| CDS |
| ENSAPQT00000044344 |
| Transcript |
| ENSAPQT00000044344 |
| Protein |
| ENSAPQP00000039401.1 |
| UniProt accession | Description |
|---|---|
| O88879 | Apoptotic protease-activating factor 1 OS=Mus musculus OX=10090 GN=Apaf1 PE=1 SV=3 |
| Q9EPV5 | Apoptotic protease-activating factor 1 OS=Rattus norvegicus OX=10116 GN=Apaf1 PE=1 SV=1 |
| Q40392 | TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0010175 (this species only) |
| Ubiquitin family | UBD|Other|Beta-prp · all ubiquitin genes in this species |
| Ubiquitin family | E3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species |
| Ubiquitin family | E3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00931 all species → | NB-ARC | NB-ARC domain | Domain | Interproscan |
| PF00400 all species → | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| PF17908 all species → | APAF1_C | APAF-1 helical domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002182 all species → | Domain | NB-ARC | Interproscan |
| IPR015943 all species → | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR001680 all species → | Repeat | WD40 repeat | Interproscan |
| IPR041452 all species → | Domain | APAF-1 helical domain | Interproscan |
| IPR042197 all species → | Homologous_superfamily | Apoptotic protease-activating factors, helical domain | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR011041 all species → | Homologous_superfamily | Soluble quinoprotein glucose/sorbosone dehydrogenase | Interproscan |
| IPR036388 all species → | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR019775 all species → | Conserved_site | WD40 repeat, conserved site | Interproscan |
| IPR020472 all species → | Repeat | G-protein beta WD-40 repeat | Interproscan |
| IPR011047 all species → | Homologous_superfamily | Quinoprotein alcohol dehydrogenase-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19849 all species → | PHOSPHOLIPASE A-2-ACTIVATING PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0043531 all species → | Molecular Function | ADP binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0010992 all species → | Biological Process | ubiquitin recycling | Interproscan |
| GO:0043130 all species → | Molecular Function | ubiquitin binding | Interproscan |
| GO:0043161 all species → | Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
ENSAPQP00000039401.1.
