Gene detail

Detailed information of ENSAPQP00000039615.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3989195.1, tensin-like isoform X3 [Paramuricea clavata]
Species abbreviation LSARM · all data for this species · gene families

Sequence

CDS

Transcript

ENSAPQT00000044608

GATCATAGGAAAGAGACCAGCGCTCCAGTGAATCATTTCAGACAAACCAGCACTCCAGTTCGAGGTCATACGGGAGACTTGAGCAGTCCAGTCACAGTGGTGATTAATAGACCAGATTCAGAGGCGAGGAGGTATAAGGAAGAGGATGATGCAGCAGGATATGAAAGCATAGACGATATTAAACCTGGCAAAGGAAAGGAGGATGTTAATATGAAGGACGTCAAAGTAAATGGTATGACAGATGAAGAATTTTTGAACAGCTACAAGCCGATTCCAGAAAAACCGAAAGATTTAGAGCTCAGTCCTGCTTCCAGTCCCAGTCCAACGACAAGCCCCAGTGATACGATGAAGAAAACGAAATTATCTCCTGCCGAACGCGGACCTGCCGTCCTTAATGAACTCATTAACGGCATCAGAACAATGAAACAAGAAATGTCTTACAAAGCGAAGGAACAGTCCGAGAATGGAGATGTCTTTGCAACTAGTCCGACCAGCGATAAATCATCTTCATCTCTCTCGCCAACTTCCACGCTATCGCGAGGAAAGCGAAGACATAGGAAGGCCTCGGACAGAGGATATGGCTCCACGAATTCAAGTTTATCTGAGTCAGAACTGTTTGTTGAAATTCCCAAGAATCCGACCGTGAAATTTGATAAAGATACGTCAGCATTCTGGTACAAACCTCATATCACAAGGGAACAAGccATTGCACTGTTACAAGACAAGCAGCCTGGAACATTTGTAATCCGAGACAGTCAGTCATACAGTGGTGCGTTTGGTCTGGCTATCAAAGTTGAAGTCCCACCGATGCACGTCATTCAGAACCAGAACAAAGACTTTGACAATATAGATCCATCTGAGTTTGTTCGACATCTCTTGATCGAGTCCACTCCAAAAGGAGTCCACCTCAAAGATTGTAAAGATGAACCATTGTTTGGAAGTCTTGCGGCATTTGTTTATCAACATTCGTTAACCGAGATCTCGCTTCCTTGCAAACTTTTATTGCCAACGAAAGATCTAACGGTTGGGACGTTAAAAATCACAGACAGACAAGAAACGGAAACTCAGTTGCTCGCACAAGGGGCAGCGTGCAACGTGGCGTATCTGGGCTCCTTCAATGTCGAGTCTCTCACGGGGCCTGCAGCTTTAAAATATGCAGTGGCGAAGATTGAACCTGGACGAAAGAACAAGGAACACGAACCCGTCTTAGTCAACTTTAAAATCAACAAACAAGGAATTACATTGACGGATAACGAAAGAAAGTTGTTCTTCCGCAAACATTATCCTCTCAAACATGTCCTTTATTGGGGAACCGATCCCGATGATACAAGATGGGATTTAACGGAATATGGCGGTGGTAATCTAGCAAGATCGTTCgtgtttatatcaagaaaagtTGACAGCGATGGAAACGAATGCCATTTATTCGCCGAGATGGATCCTAAACAACCTGCTTCGACTGTTGTCGATGTTATCACGAAAATAATCTCAAATGTGAACTCATGAAACTGCTAAAAAGACCCTGATCACTTTGGTCATGCGCAGTAAGAAGATGGAGGTACCTTTACACCGGTAACACGTGCAAAAGCCAATTTCGGTGGTCTTCCTATGCAATTCAGTTTAAGATCAGCTGCAGTACTACATTTTTAGAAAGCTTTTTCTTTCTAAATTCTTAAGGAATCAGTAATTTATTGTATATTAGgaaaaactatatatatatggagAAGCATACTACGTATTTACATGATATGTATGTAAATACTGTTTAATTTGGTTTTGATGTATCGGTGCAATTTCAATCTAGGACACGGTATAGTAATCTGAAAAAAGCAAAAGTAAGTGAGGTTGGCGTGTAAATATTCACACGTAAATAGACCTCGTGCACTGTGACGTTTTGTTGCGTTACGTCGCTACAACTACCAGGATGCTTTGCGAGTGTTGTAGTTGTTTTCTCGTAAAGCATGCTGGTTGTTGTAGTAACGCATCGCAACAAAACGTCTTTCATACGgtctattaaaaatataagttATGATTGAATGTTTTAGCTTTCGACAAATGTACAGTACGGAGCCTGATTTCCCACTATCATTGTcgttgctgctgttgttgttgtaggCAAAGTTATTGCCTGTTAGCGTTGTGTTATTTTGAAATGACGTCACGAAGTTTTTAGAATGGtagatgacgtcattgaaaTGACGTAACATGACGTCATTGGAATCGTTGTTTACGTCATATTTGGGTAACAAACCGATTCTTTCTatgaagtgataatgaaactACAGTTACTGAAATACATGGCTTGTAGACTTATTTACTGCACCATACAAGTCTTCAAACCATGTTCTGTATTTATTTAAATGTGGAAAAACATTCATTGCCTTTGCACAGTATACTGTAATCTTGGAAAAGCCATGTCTCAGAACAGTTTCTTTTTAATActgcaaatatattttttgtataataaATGTTAATATAAGAAATGATTAAATATTACACAATATG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9GLM4	Tensin-1 OS=Bos taurus OX=9913 GN=TNS1 PE=2 SV=2
Q9HBL0	Tensin-1 OS=Homo sapiens OX=9606 GN=TNS1 PE=1 SV=3
E9Q0S6	Tensin-1 OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001585 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08416 all species →	PTB	Phosphotyrosine-binding domain	Domain	Interproscan
PF00017 all species →	SH2	SH2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR033929 all species →	Domain	Tensin, phosphotyrosine-binding domain	Interproscan
IPR013625 all species →	Domain	Tensin/EPS8 phosphotyrosine-binding domain	Interproscan
IPR006020 all species →	Domain	PTB/PI domain	Interproscan
IPR000980 all species →	Domain	SH2 domain	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR036860 all species →	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR051484 all species →	Family	Tensin Phosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45734 all species →	TENSIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005925 all species →	Cellular Component	focal adhesion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18080	TNS; tensin	-	Protein phosphatases and associated proteins	ko01009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.