Gene detail

Detailed information of ENSAPQP00000039634.1 in Leptogorgia sarmentosa

Genomic Location: not available for this species
NR annotation: CAB3980201.1, nuclear RNA export factor 1 [Paramuricea clavata]
Species Leptogorgia sarmentosa · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003680 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03943 all species →	TAP_C	TAP C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009060 all species →	Homologous_superfamily	UBA-like superfamily	Interproscan
IPR005637 all species →	Domain	TAP C-terminal (TAP-C) domain	Interproscan
IPR030217 all species →	Family	Nuclear RNA export factor	Interproscan
IPR032710 all species →	Homologous_superfamily	NTF2-like domain superfamily	Interproscan
IPR018222 all species →	Domain	Nuclear transport factor 2, eukaryote	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10662 all species →	NUCLEAR RNA EXPORT FACTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0051028 all species →	Biological Process	mRNA transport	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0016973 all species →	Biological Process	poly(A)+ mRNA export from nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23327	HIKESHI; protein Hikeshi	-	Chaperones and folding catalysts	ko03110	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.